RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 GARSP41250 739 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 GRIA2P42262 883 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 MTTPP55157 894 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 OLIG2Q13516 323 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SPARCL1Q14515 664 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 PSMD5Q16401 504 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 FAM91A1Q658Y4 838 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 FAM117BQ6P1L5 589 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 Q6ZNX1 250 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 FAM47EQ6ZV65 393 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 NLRP9Q7RTR0 991 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 PRPF39Q86UA1 669 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 MZB1Q8WU39 189 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 ZNF419Q96HQ0 510 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 PRICKLE1Q96MT3 831 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SERPINB11Q96P15 392 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CLSTN3Q9BQT9 956 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CCDC77Q9BR77 488 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SIKE1Q9BRV8 207 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 UTP6Q9NYH9 597 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 hCG_2014768A0A024R1R8 64 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TCRBV9S1A1TA0A576 114 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CCDC162PA2VCL2 907 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SOX1O00570 391 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SEC24AO95486 1093 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CSF2RAP15509 400 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 OR1D2P34982 312 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 FDFT1P37268 417 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 ALDH7A1P49419 539 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 ASPHQ12797 758 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 BCL2A1Q16548 175 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 USP41Q3LFD5 358 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TMCO4Q5TGY1 634 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 RWDD4Q6NW29 188 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 BORAQ6PGQ7 559 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 NET1Q7Z628 596 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TRABD2AQ86V40 505 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 PALM2Q8IXS6 379 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 DCAKDQ8WVC6 231 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 ABTB1Q969K4 478 aaPredicted RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 MCUR1Q96AQ8 359 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 NMD3Q96D46 503 aaKnown RBP13.25□□□□□ -0.29
CPNE1-201ENST00000317677 CFAP36Q96G28 342 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SMYD2Q9NRG4 433 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 IGSF9Q9P2J2 1179 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 TLR6Q9Y2C9 796 aa13.25□□□□□ -0.29
CPNE1-201ENST00000317677 SLC38A8A6NNN8 435 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 E9PAM4 449 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 TBX4P57082 545 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 GEMIN4P57678 1058 aaKnown RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 AP2B1P63010 937 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 NRG1Q02297 640 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 CDC16Q13042 620 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 MED21Q13503 144 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 RASA2Q15283 850 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 PDZD4Q76G19 769 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 SRRM1Q8IYB3 904 aaKnown RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 SLC39A11Q8N1S5 342 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 TMEM199Q8N511 208 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 DTX3LQ8TDB6 740 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 LRCH3Q96II8 777 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 PAFAH2Q99487 392 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 FRMD8Q9BZ67 464 aaPredicted RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 NOL6Q9H6R4 1146 aaKnown RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 CCSER2Q9H7U1 834 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 PIH1D1Q9NWS0 290 aaKnown RBP13.24□□□□□ -0.29
CPNE1-201ENST00000317677 PLK2Q9NYY3 685 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 CLIC5Q9NZA1 410 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 MPP6Q9NZW5 540 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 ZNHIT2Q9UHR6 403 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 SLC24A2Q9UI40 661 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 BACE2Q9Y5Z0 518 aa13.24□□□□□ -0.29
CPNE1-201ENST00000317677 A0A1W2PPM1 405 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ZBTB24O43167 697 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 CBFA2T3O75081 653 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 IGLV3-27P01718 113 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 RFC2P35250 354 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 MLLT6P55198 1093 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 WDR5P61964 334 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SMARCB1Q12824 385 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 DNAJC3Q13217 504 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 PPIGQ13427 754 aaKnown RBP eCLIP13.23□□□□□ -0.295e-12■■□□□ 13.5
CPNE1-201ENST00000317677 TRMT5Q32P41 509 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 AFMIDQ63HM1 303 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 AAGABQ6PD74 315 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 UNC5AQ6ZN44 842 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 MTDHQ86UE4 582 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SATL1Q86VE3 508 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 PDSS2Q86YH6 399 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 C2orf15Q8WU43 125 aaKnown RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 ITPKCQ96DU7 683 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 MYEOVQ96EZ4 313 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 MLPHQ9BV36 600 aaPredicted RBP13.23□□□□□ -0.29
CPNE1-201ENST00000317677 TTLL2Q9BWV7 592 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SLC39A8Q9C0K1 460 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 TAS2R1Q9NYW7 299 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 FETUBQ9UGM5 382 aa13.23□□□□□ -0.29
CPNE1-201ENST00000317677 SMG5Q9UPR3 1016 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms