RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 NLRP14Q86W24 1093 aa12.9□□□□□ -0.34
CKS2-201ENST00000314355 RTL3Q8N8U3 475 aaKnown RBP12.9□□□□□ -0.34
CKS2-201ENST00000314355 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
CKS2-201ENST00000314355 IFT43Q96FT9 208 aa12.9□□□□□ -0.34
CKS2-201ENST00000314355 EIF3CQ99613 913 aaKnown RBP12.9□□□□□ -0.34
CKS2-201ENST00000314355 FZD10Q9ULW2 581 aa12.9□□□□□ -0.34
CKS2-201ENST00000314355 SCINQ9Y6U3 715 aa12.9□□□□□ -0.34
CKS2-201ENST00000314355 A0A1W2PQC6 194 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 FAM72CH0Y354 149 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 PRPSAP2O60256 369 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 GZMAP12544 262 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 ATP1A3P13637 1013 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 RABIFP47224 123 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 HNRNPKP61978 463 aaKnown RBP eCLIP12.89□□□□□ -0.35
CKS2-201ENST00000314355 RPL7AP62424 266 aaKnown RBP12.89□□□□□ -0.35
CKS2-201ENST00000314355 KLHL30Q0D2K2 578 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 PTK2BQ14289 1009 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 SMAD1Q15797 465 aaKnown RBP12.89□□□□□ -0.35
CKS2-201ENST00000314355 ZNF284Q2VY69 593 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 ERMARDQ5T6L9 678 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 FAM72AQ5TYM5 149 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 FAM72DQ6L9T8 149 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 CAVIN1Q6NZI2 390 aaKnown RBP12.89□□□□□ -0.35
CKS2-201ENST00000314355 Q6ZSR6 202 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 IRF2BP2Q7Z5L9 587 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 PTAR1Q7Z6K3 402 aaPredicted RBP12.89□□□□□ -0.35
CKS2-201ENST00000314355 FAM72BQ86X60 149 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 PROSER1Q86XN7 944 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 SPATS2Q86XZ4 545 aaKnown RBP12.89□□□□□ -0.35
CKS2-201ENST00000314355 TMEM145Q8NBT3 493 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 CXorf40AQ8TE69 158 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 KLHL32Q96NJ5 620 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 DUSP23Q9BVJ7 150 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 EDEM3Q9BZQ6 932 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 TTYH3Q9C0H2 523 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 HAUS4Q9H6D7 363 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 NDFIP2Q9NV92 336 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 TOR4AQ9NXH8 423 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 TMEM63CQ9P1W3 806 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 ZNF212Q9UDV6 495 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 FADS3Q9Y5Q0 445 aa12.89□□□□□ -0.35
CKS2-201ENST00000314355 MAP1BP46821 2468 aaKnown RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 LAMA1P25391 3075 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 TRABD2BA6NFA1 517 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 LRRC53A6NM62 1247 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 C10orf142B7Z368 130 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 RASA4BC9J798 803 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 GOLGA6L19H0YKK7 550 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 EEF2KO00418 725 aaKnown RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 TEX33O43247 280 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 RASA4O43374 803 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 SDC3O75056 442 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 ZNF821O75541 412 aaPredicted RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 DKK1O94907 266 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 UGT2B4P06133 528 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 MYBL1P10243 752 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 PTMSP20962 102 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 SUOXP51687 545 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 ZNF135P52742 658 aaPredicted RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 THOP1P52888 689 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 DNAJC3Q13217 504 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 ZNF211Q13398 564 aaPredicted RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 SEL1L3Q68CR1 1132 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 LEKR1Q6ZMV7 388 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 PYROXD2Q8N2H3 581 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 BTN2A2Q8WVV5 523 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 ASB12Q8WXK4 309 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 ABCG4Q9H172 646 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 FZD3Q9NPG1 666 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 AIPL1Q9NZN9 384 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 UBA2Q9UBT2 640 aaPredicted RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 CA5BQ9Y2D0 317 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 BZW2Q9Y6E2 419 aaKnown RBP12.88□□□□□ -0.35
CKS2-201ENST00000314355 EPG5Q9HCE0 2579 aa12.88□□□□□ -0.35
CKS2-201ENST00000314355 CHD8Q9HCK8 2581 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 IGLON5A6NGN9 336 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 WASH4PA8MWX3 477 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 RIOK3O14730 519 aaKnown RBP12.87□□□□□ -0.35
CKS2-201ENST00000314355 TM7SF2O76062 418 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 TMCC1O94876 653 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 FTLP02792 175 aaPredicted RBP12.87□□□□□ -0.35
CKS2-201ENST00000314355 NDST2P52849 883 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 CLDN2P57739 230 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 ELP6Q0PNE2 266 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 MAMLD1Q13495 774 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 SHBQ15464 509 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 ERAP2Q6P179 960 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 PARS2Q7L3T8 475 aaKnown RBP12.87□□□□□ -0.35
CKS2-201ENST00000314355 APTXQ7Z2E3 356 aaKnown RBP12.87□□□□□ -0.35
CKS2-201ENST00000314355 ABI3BPQ7Z7G0 1075 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 DNAAF5Q86Y56 855 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 UMODL1-AS1Q8N2C9 162 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 DENND6BQ8NEG7 585 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 OR13H1Q8NG92 308 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 OR6K2Q8NGY2 324 aa12.87□□□□□ -0.35
CKS2-201ENST00000314355 HCAR2Q8TDS4 363 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms