RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GLRX5Q86SX6 157 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 HORMAD1Q86X24 394 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 RNF214Q8ND24 703 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 TSC1Q92574 1164 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 CELF6Q96J87 481 aaKnown RBP14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 SERAC1Q96JX3 654 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 NSMCE3Q96MG7 304 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 CNTNAP3BQ96NU0 1288 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 PACSIN1Q9BY11 444 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 CNTNAP3Q9BZ76 1288 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 CAAP1Q9H8G2 361 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 MRPL47Q9HD33 250 aaKnown RBP14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 GPR27Q9NS67 375 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 DMTF1Q9Y222 760 aa14.84□□□□□ -0.03
PPP1CA-201ENST00000312989 AKAP13Q12802 2813 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 A0A1W2PQU0 124 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 EEF2KO00418 725 aaKnown RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 PCDHGA12O60330 932 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 PRAMEF11O60813 436 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 PEX11BO96011 259 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 EIF4A3P38919 411 aaKnown RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 RGRP47804 291 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 HCAR3P49019 387 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ARSEP51690 589 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 NEK3P51956 506 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 GEMIN4P57678 1058 aaKnown RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 MAPK8IP2Q13387 824 aaPredicted RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ACAP1Q15027 740 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 MYLK3Q32MK0 819 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 SPECC1LQ69YQ0 1117 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ARHGAP36Q6ZRI8 547 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 MFSD2AQ8NA29 543 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 FAM71BQ8TC56 605 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 CASKIN2Q8WXE0 1202 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 LRIG1Q96JA1 1093 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ELF4Q99607 663 aaPredicted RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 NUP85Q9BW27 656 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 SLC32A1Q9H598 525 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 ETNK2Q9NVF9 386 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 GGT7Q9UJ14 662 aa14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 FARP1Q9Y4F1 1045 aaPredicted RBP14.83□□□□□ -0.04
PPP1CA-201ENST00000312989 FREM2Q5SZK8 3169 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 ACACBO00763 2458 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 AREL1O15033 823 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 MUSKO15146 869 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 INSIG1O15503 277 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 BUB1O43683 1085 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 AP1G1O43747 822 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 PRPSAP2O60256 369 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 RNF8O76064 485 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 RARAP10276 462 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 PRLRP16471 622 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 SPINK2P20155 84 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 IL4RP24394 825 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 RECQLP46063 649 aaPredicted RBP14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 PAPOLAP51003 745 aaKnown RBP14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 SIM1P81133 766 aaPredicted RBP14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 TBX2Q13207 712 aaPredicted RBP14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 SMTNL2Q2TAL5 461 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 GCNT7Q6ZNI0 430 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 POLNQ7Z5Q5 900 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 ZDHHC6Q9H6R6 413 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 ITM2BQ9Y287 266 aa14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.82□□□□□ -0.04
PPP1CA-201ENST00000312989 SSU72P8A0A1W2PR75 194 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 TSPAN11A1L157 253 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 C16orf96A6NNT2 1141 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 TLR4O00206 839 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 RAD51BO15315 384 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 MFAP3LO75121 409 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 UGT2B4P06133 528 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 NUDT1P36639 197 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 CCT8P50990 548 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 DNA2P51530 1060 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 IL9RQ01113 521 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 PIGHQ14442 188 aaPredicted RBP14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 TRIP6Q15654 476 aaKnown RBP14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 SLC18A3Q16572 532 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ZNF805Q5CZA5 627 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 CCDC122Q5T0U0 273 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 PRPF39Q86UA1 669 aaKnown RBP14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 IQCHQ86VS3 1027 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ZSWIM9Q86XI8 627 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 SLC22A18ASQ8N1D0 253 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 SAP25Q8TEE9 199 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 KLK6Q92876 244 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 PPP1R16AQ96I34 528 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 EXOC2Q96KP1 924 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 CSPG4P5Q96PW8 444 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 KLF6Q99612 283 aaPredicted RBP14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 CHP1Q99653 195 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ERVMER34-1Q9H9K5 563 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 PCDH18Q9HCL0 1135 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 FZD3Q9NPG1 666 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 AASDHPPTQ9NRN7 309 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ABHD10Q9NUJ1 306 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ANAPC7Q9UJX3 599 aa14.81□□□□□ -0.04
PPP1CA-201ENST00000312989 ANGPTL2Q9UKU9 493 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms