RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 CYP3A43Q9HB55 503 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PCDH9Q9HC56 1237 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TLR8Q9NR97 1041 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 FAM105AQ9NUU6 356 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 PLA2G4CQ9UP65 541 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 WBP11Q9Y2W2 641 aaKnown RBP8.28□□□□□ -1.08
VPS41-202ENST00000310301 TAF6LQ9Y6J9 622 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 GNG14A0A1W2PPG7 69 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 C2orf81A6NN90 581 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ITGB3P05106 788 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CSH1P0DML2 217 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 CSH2P0DML3 217 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 DRD4P21917 467 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 RARRES1P49788 294 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 FAAP100Q0VG06 881 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 TSC22D1Q15714 1073 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 ZHX1-C8orf76Q96EF9 292 aa8.28□□□□□ -1.08
VPS41-202ENST00000310301 FAM237BA0A1B0GVD1 139 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 ERI2A8K979 691 aaKnown RBP8.27□□□□□ -1.08
VPS41-202ENST00000310301 PROSCO94903 275 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 SHBGP04278 402 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 DARSP14868 501 aaKnown RBP8.27□□□□□ -1.08
VPS41-202ENST00000310301 LBPP18428 481 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 C5orf22Q49AR2 442 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 EGFLAMQ63HQ2 1017 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 MYO1HQ8N1T3 1032 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 FNDC5Q8NAU1 212 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 DZANK1Q9NVP4 752 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 SHOC2Q9UQ13 582 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 GSTK1Q9Y2Q3 226 aa8.27□□□□□ -1.08
VPS41-202ENST00000310301 RGPD5Q99666 1765 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 M0QYT0 321 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CD3EAPO15446 510 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 SLC37A4O43826 429 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 IRF1P10914 325 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PCNAP12004 261 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 RRM1P23921 792 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 GRK3P35626 688 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 STAT5AP42229 794 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 MTHFRP42898 656 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CCNG1P51959 295 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ADAM17P78536 824 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TRAP1Q12931 704 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 RBM23Q86U06 439 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 STX12Q86Y82 276 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PALB2Q86YC2 1186 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 HIPK1Q86Z02 1210 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CREG2Q8IUH2 290 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.27□□□□□ -1.092e-7■■■■■ 278.5
VPS41-202ENST00000310301 PARP8Q8N3A8 854 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ZNF671Q8TAW3 534 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ACTRT2Q8TDY3 377 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 BADQ92934 168 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 B3GALT6Q96L58 329 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TTPALQ9BTX7 342 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CINPQ9BW66 212 aaPredicted RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 WDR12Q9GZL7 423 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 STN1Q9H668 368 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 CERS4Q9HA82 394 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PNPLA3Q9NST1 481 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ING3Q9NXR8 418 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 NUDT5Q9UKK9 219 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CDH9Q9ULB4 789 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TMCO1Q9UM00 188 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 WDR27A2RRH5 827 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 FBXO21O94952 628 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CNPP09543 421 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 TUSC3Q13454 348 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 LPIN1Q14693 890 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 DSG4Q86SJ6 1040 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 SLC47A2Q86VL8 602 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ZNF614Q8N883 585 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TEKT5Q96M29 485 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PHACTR1Q9C0D0 580 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 GPR88Q9GZN0 384 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ELOVL4Q9GZR5 314 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TIMMDC1Q9NPL8 285 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 RPS6KB2Q9UBS0 482 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ENOPH1Q9UHY7 261 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 HPSEQ9Y251 543 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 SCN11AQ9UI33 1791 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TRAV19A0A0A6YYK7 116 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 BIRC5O15392 142 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 TMCC2O75069 709 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ZMPSTE24O75844 475 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PAICSP22234 425 aaKnown RBP8.27□□□□□ -1.09
VPS41-202ENST00000310301 GRIA3P42263 894 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 SCNN1GP51170 649 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 PRKAA2P54646 552 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 BNC1Q01954 994 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 GRB10Q13322 594 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ORC1Q13415 861 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CDH18Q13634 790 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 FGD3Q5JSP0 725 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 ERAP2Q6P179 960 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 RASSF6Q6ZTQ3 369 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 CAMKK1Q8N5S9 505 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 EFCAB3Q8N7B9 438 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 COLGALT1Q8NBJ5 622 aa8.27□□□□□ -1.09
VPS41-202ENST00000310301 SLC25A23Q9BV35 468 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms