RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 STXBP5Q5T5C0 1151 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 GAREM2Q75VX8 874 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 TMEM110Q86TL2 294 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 ITFG1Q8TB96 612 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 KCTD13Q8WZ19 329 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 SERAC1Q96JX3 654 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 DDX18Q9NVP1 670 aaKnown RBP12.9□□□□□ -0.34
VANGL1-201ENST00000310260 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 TRPM5Q9NZQ8 1165 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 CD207Q9UJ71 328 aa12.9□□□□□ -0.34
VANGL1-201ENST00000310260 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
VANGL1-201ENST00000310260 FARP1Q9Y4F1 1045 aaPredicted RBP12.9□□□□□ -0.34
VANGL1-201ENST00000310260 TBX18O95935 607 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 C1RP00736 705 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 HNRNPCP07910 306 aaKnown RBP eCLIP12.9□□□□□ -0.35
VANGL1-201ENST00000310260 HOXA9P31269 272 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 CDH5P33151 784 aaPredicted RBP12.9□□□□□ -0.35
VANGL1-201ENST00000310260 GALK1P51570 392 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 SNX16P57768 344 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 CBX3Q13185 183 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 NADK2Q4G0N4 442 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 MSS51Q4VC12 460 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 RAB41Q5JT25 222 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 FAM102AQ5T9C2 384 aaPredicted RBP12.9□□□□□ -0.35
VANGL1-201ENST00000310260 TXNDC8Q6A555 127 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 SH2D5Q6ZV89 423 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 GET4Q7L5D6 327 aaPredicted RBP12.9□□□□□ -0.35
VANGL1-201ENST00000310260 GPR149Q86SP6 731 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 ABTB1Q969K4 478 aaPredicted RBP12.9□□□□□ -0.35
VANGL1-201ENST00000310260 GCNAQ96QF7 691 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 CYP2S1Q96SQ9 504 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 NACA2Q9H009 215 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 S1PR5Q9H228 398 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 NMUR1Q9HB89 426 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 PNPLA8Q9NP80 782 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 SCML2Q9UQR0 700 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 ZNF148Q9UQR1 794 aa12.9□□□□□ -0.35
VANGL1-201ENST00000310260 A0A0C4DFX4 3053 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 MTCL1Q9Y4B5 1905 aaKnown RBP12.89□□□□□ -0.35
VANGL1-201ENST00000310260 PRR5-ARHGAP8B1AHC4 643 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 STK10O94804 968 aaKnown RBP12.89□□□□□ -0.35
VANGL1-201ENST00000310260 KRT10P13645 584 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 MRPS5P82675 430 aaKnown RBP12.89□□□□□ -0.35
VANGL1-201ENST00000310260 ARHGAP8P85298 464 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 DCTN2Q13561 401 aaKnown RBP12.89□□□□□ -0.35
VANGL1-201ENST00000310260 CYLC2Q14093 348 aaPredicted RBP12.89□□□□□ -0.35
VANGL1-201ENST00000310260 TEAD2Q15562 447 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 TBCCQ15814 346 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 CES4AQ5XG92 561 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 RTL10Q7L3V2 364 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 XYLT1Q86Y38 959 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 ALDH16A1Q8IZ83 802 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 MSLNLQ96KJ4 702 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 C7orf26Q96N11 449 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 BTBD9Q96Q07 612 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 SLX1AQ9BQ83 275 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 WWP1Q9H0M0 922 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 OSER1Q9NX31 292 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 SOX13Q9UN79 622 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 PTPRDP23468 1912 aa12.89□□□□□ -0.35
VANGL1-201ENST00000310260 SYNJ2BP-COX16A0A087WUM0 186 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 C2orf78A6NCI8 922 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 TXNDC9O14530 226 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CASQ2O14958 399 aaPredicted RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MAGEB3O15480 346 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CLPTM1O96005 669 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 FSHRP23945 695 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 DAOAP59103 153 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 YWHAGP61981 247 aaKnown RBP eCLIP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 SLC18A2Q05940 514 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 TMED1Q13445 227 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 TLR1Q15399 786 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 BSPRYQ5W0U4 402 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MON1BQ7L1V2 547 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 SCD5Q86SK9 330 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 PHF13Q86YI8 300 aaPredicted RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 TMC8Q8IU68 726 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MAP7D3Q8IWC1 876 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MARVELD2Q8N4S9 558 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 ZBTB8BQ8NAP8 495 aaPredicted RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 PYROXD1Q8WU10 500 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CCSER2Q9H7U1 834 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 PCDH9Q9HC56 1237 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CNGB3Q9NQW8 809 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 TLR8Q9NR97 1041 aaKnown RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 COX16Q9P0S2 106 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 UXTQ9UBK9 157 aaPredicted RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 DMTF1Q9Y222 760 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 USP3Q9Y6I4 520 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MDM4O15151 490 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CCNT2O60583 730 aaKnown RBP12.88□□□□□ -0.35
VANGL1-201ENST00000310260 FBXO21O94952 628 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 MT-ND3P03897 115 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 CALB1P05937 261 aa12.88□□□□□ -0.35
VANGL1-201ENST00000310260 NCAM1P13591 858 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 162 ms