RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 ZSWIM2Q8NEG5 633 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 CLHC1Q8NHS4 586 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 ZNF285Q96NJ3 590 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 BBS4Q96RK4 519 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 SH2D3AQ9BRG2 576 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 PHF20Q9BVI0 1012 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.42□□□□□ -1.065e-6■■■■■ 34.5
PPARGC1B-201ENST00000309241 NDUFAF1Q9Y375 327 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 PTPRUQ92729 1446 aa8.42□□□□□ -1.06
PPARGC1B-201ENST00000309241 FBP2O00757 339 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 EXTL3O43909 919 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 ZNF682O95780 498 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PTGER2P43116 358 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CLIP3Q96DZ5 547 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 KANSL3Q9P2N6 904 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PFDN2Q9UHV9 154 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 LOC110117498-PIK3R3F6TDL0 507 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CRTAMO95727 393 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 THP07101 528 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 AMD1P17707 334 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 RENBPP51606 427 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 STOX1Q6ZVD7 989 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PIK3R3Q92569 461 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 USP7Q93009 1102 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 C12orf66Q96MD2 445 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 ROGDIQ9GZN7 287 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TRHDEQ9UKU6 1024 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 MYH1P12882 1939 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 MYH4Q9Y623 1939 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 RARAP10276 462 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CLUP10909 449 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DPEP1P16444 411 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 HOXC12P31275 282 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 ST3GAL1Q11201 340 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CAMK1Q14012 370 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 GLRA4Q5JXX5 417 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 GPR107Q5VW38 600 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TOP1MTQ969P6 601 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 ZNF669Q96BR6 464 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 GMIPQ9P107 970 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DGKBQ9Y6T7 804 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 AVILO75366 819 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 BIKQ13323 160 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 QPRTQ15274 297 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 KIAA1324Q6UXG2 1013 aaKnown RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DHFR2Q86XF0 187 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PCDHGA10Q9Y5H3 936 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 LOC100506127A0A0U1RQW1 187 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 EFCAB10A6NFE3 127 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TFECO14948 347 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 SHBGP04278 402 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PRKACBP22694 351 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 SETMARQ53H47 684 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 BRSK2Q8IWQ3 736 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 OR8H3Q8N146 312 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DHRSXQ8N5I4 330 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 LRRC17Q8N6Y2 441 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 RP9Q8TA86 221 aaKnown RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CYP3A43Q9HB55 503 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 SERPINA6P08185 405 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 POU1F1P28069 291 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PDX1P52945 283 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 QPCTQ16769 361 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TMEM159Q96B96 161 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DHRS1Q96LJ7 313 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 GPN1Q9HCN4 374 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CHORDC1Q9UHD1 332 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 PCYOX1Q9UHG3 505 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 QSOX1O00391 747 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CAMTA2O94983 1202 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 FGRP09769 529 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 DSG3P32926 999 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 MAPKAPK2P49137 400 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 NDUFV1P49821 464 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 KCNK18Q7Z418 384 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 RAB2BQ8WUD1 216 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 ZNF717Q9BY31 904 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CDC42EP4Q9H3Q1 356 aaKnown RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 A0A087X1B8 175 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 SLC12A8A0AV02 714 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 NDUFB10O96000 172 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 NMT1P30419 496 aaKnown RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 HPCAL1P37235 193 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CDH4P55283 916 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 CDKAL1Q5VV42 579 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 GPAT2Q6NUI2 795 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 FBXO16Q8IX29 292 aaPredicted RBP8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TBCDQ9BTW9 1192 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 USP31Q70CQ4 1352 aa8.41□□□□□ -1.06
PPARGC1B-201ENST00000309241 TBC1D3BA6NDS4 549 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 GSSP48637 474 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 NFE2Q16621 373 aaPredicted RBP8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 LDLRAP1Q5SW96 308 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 HDHD2Q9H0R4 259 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 ATXN3LQ9H3M9 355 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 EPB41L1Q9H4G0 881 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 MROH8Q9H579 483 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 NT5MQ9NPB1 228 aa8.4□□□□□ -1.06
PPARGC1B-201ENST00000309241 CPA4Q9UI42 421 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms