RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 AOC3Q16853 763 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ARHGAP40Q5TG30 622 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DMRTA1Q5VZB9 504 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KCTD16Q68DU8 428 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 BORAQ6PGQ7 559 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FRMD5Q7Z6J6 570 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 NEK8Q86SG6 692 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MYPNQ86TC9 1320 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MRPL52Q86TS9 123 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 TSPAN33Q86UF1 283 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 HOOK3Q86VS8 718 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 PM20D2Q8IYS1 436 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ABRAQ8N0Z2 381 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF740Q8NDX6 193 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SCAMP5Q8TAC9 235 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RRP36Q96EU6 259 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 IL17RAQ96F46 866 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FAM71F1Q96KD3 344 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 FAM210BQ96KR6 192 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 EGLN2Q96KS0 407 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF578Q96N58 590 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 WFIKKN1Q96NZ8 548 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TMED9Q9BVK6 235 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RNF32Q9H0A6 362 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KIAA1683Q9H0B3 1180 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF703Q9H7S9 590 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 ADAM22Q9P0K1 906 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CFAP97Q9P2B7 532 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 HMGXB4Q9UGU5 601 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MAGEL2Q9UJ55 1249 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CCPG1Q9ULG6 757 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 IGSF9BQ9UPX0 1349 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CARD8Q9Y2G2 431 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KLHL20Q9Y2M5 609 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 WIPI2Q9Y4P8 454 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DIP2CQ9Y2E4 1556 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RNF123Q5XPI4 1314 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 POM121CA8CG34 1229 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MCIDASD6RGH6 385 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 H0Y858 1186 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 GMFGO60234 142 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CRYABP02511 175 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 ASGR1P07306 291 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SUPT20HL2P0C7V6 817 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ATP1A3P13637 1013 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CCNA2P20248 432 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CTNNA1P35221 906 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 NR2C2P49116 596 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ALDH5A1P51649 535 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 KPNA2P52292 529 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 HDAC4P56524 1084 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TGFB2P61812 414 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 RPS16P62249 146 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 E2F1Q01094 437 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SF3A2Q15428 464 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 KIZQ2M2Z5 673 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 COBLL1Q53SF7 1204 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 FAM47AQ5JRC9 791 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 WDR45BQ5MNZ6 344 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ARMC12Q5T9G4 340 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LRRC38Q5VT99 294 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CYP20A1Q6UW02 462 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LRP11Q86VZ4 500 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LIX1LQ8IVB5 337 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ALDH16A1Q8IZ83 802 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 SYT14Q8NB59 555 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MRPS31Q92665 395 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 LRRC45Q96CN5 670 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 ZNF837Q96EG3 531 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 ACSBG1Q96GR2 724 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 DUX3Q96PT4 197 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 LGMNQ99538 433 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 PHACTR1Q9C0D0 580 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 C2orf40Q9H1Z8 148 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 CNTD2Q9H8S5 307 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.28□□□□□ -2.2
CEP290-201ENST00000309041 POGKQ9P215 609 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 KIF17Q9P2E2 1029 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 AJAP1Q9UKB5 411 aaPredicted RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 PCOLCE2Q9UKZ9 415 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 MGAT4AQ9UM21 535 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 TDRKHQ9Y2W6 561 aaKnown RBP1.28□□□□□ -2.2
CEP290-201ENST00000309041 STARD13Q9Y3M8 1113 aa1.28□□□□□ -2.2
CEP290-201ENST00000309041 THSD7AQ9UPZ6 1657 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 SERTM1A2A2V5 107 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 FAM47E-STBD1D6RA91 191 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 DYRK3O43781 588 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 TIPRLO75663 272 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 KLHL18O94889 574 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 CER1O95813 267 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 POLR3DP05423 398 aaPredicted RBP1.28□□□□□ -2.21
CEP290-201ENST00000309041 NFICP08651 508 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 ALDOCP09972 364 aaKnown RBP1.28□□□□□ -2.21
CEP290-201ENST00000309041 TFEBP19484 476 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 GPD1P21695 349 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 EEF1GP26641 437 aaKnown RBP1.28□□□□□ -2.21
CEP290-201ENST00000309041 ARNTP27540 789 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 MCM7P33993 719 aa1.28□□□□□ -2.21
CEP290-201ENST00000309041 EIF2DP41214 584 aaKnown RBP1.28□□□□□ -2.21
CEP290-201ENST00000309041 PTGIRP43119 386 aa1.28□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms