RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 RGSL1A5PLK6 1076 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 HAS3O00219 553 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 AP1G1O43747 822 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 F9P00740 461 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 ZNF865P0CJ78 1059 aaPredicted RBP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 THRAP10827 490 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 XRCC1P18887 633 aaPredicted RBP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 ARNTP27540 789 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 PM20D1Q6GTS8 502 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 PKN3Q6P5Z2 889 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 RNF135Q8IUD6 432 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 SMARCD1Q96GM5 515 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 CNDP1Q96KN2 507 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 VAT1Q99536 393 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 TBL1YQ9BQ87 522 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 RTP3Q9BQQ7 232 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 ETAA1Q9NY74 926 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 ACOT9Q9Y305 439 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 ARL5CA6NH57 179 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 DDHD2O94830 711 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 POMCP01189 267 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 HNRNPLP14866 589 aaKnown RBP eCLIP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 TCN1P20061 433 aaPredicted RBP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 MRPS22P82650 360 aaKnown RBP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 SLC12A1Q13621 1099 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 SEPT6Q14141 434 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 MMEL1Q495T6 779 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 LRRC8EQ6NSJ5 796 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 KYQ8NBH2 561 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 STYXQ8WUJ0 223 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 HAPLN3Q96S86 360 aa15.32■□□□□ 0.04
CSDC2-201ENST00000306149 C6orf203Q9P0P8 240 aaPredicted RBP15.32■□□□□ 0.04
CSDC2-201ENST00000306149 FAM95CA0A1B0GW59 222 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CABYRO75952 493 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 MOCS2O96007 188 aaPredicted RBP15.31■□□□□ 0.04
CSDC2-201ENST00000306149 DPP6P42658 865 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 HK2P52789 917 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CYLC2Q14093 348 aaPredicted RBP15.31■□□□□ 0.04
CSDC2-201ENST00000306149 PCSK7Q16549 785 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 INTS6LQ5JSJ4 861 aaKnown RBP15.31■□□□□ 0.04
CSDC2-201ENST00000306149 TSTD2Q5T7W7 516 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 DENND5AQ6IQ26 1287 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 DCLRE1AQ6PJP8 1040 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 ARHGAP12Q8IWW6 846 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 ATPAF2Q8N5M1 289 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 FAM156AQ8NDB6 213 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 STON2Q8WXE9 905 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 ELMO2Q96JJ3 720 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 NDNQ99608 321 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 SLC39A8Q9C0K1 460 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 BRD8Q9H0E9 1235 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 MID2Q9UJV3 735 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 COMMD3-BMI1R4GMX3 469 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 SLC1A2P43004 574 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CSRP3P50461 194 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 TAS2R39P59534 338 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 MS4A2Q01362 244 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 PDK3Q15120 406 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 FAM110CQ1W6H9 321 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 PCID2Q5JVF3 399 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 FBXL19Q6PCT2 694 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 UGT2A3Q6UWM9 527 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 LRRTM3Q86VH5 581 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 ICA1LQ8NDH6 482 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 TRPV6Q9H1D0 765 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CYP4F12Q9HCS2 524 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 VCX3AQ9NNX9 186 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CHST12Q9NRB3 414 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 MPP6Q9NZW5 540 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 CDH9Q9ULB4 789 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 PSMD13Q9UNM6 376 aa15.31■□□□□ 0.04
CSDC2-201ENST00000306149 TARM1B6A8C7 271 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 F8W810 466 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SLC22A2O15244 555 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 B3GAT3O94766 335 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 GRIA2P42262 883 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ARCN1P48444 511 aaKnown RBP15.3■□□□□ 0.04
CSDC2-201ENST00000306149 CHN2P52757 468 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 RAB10P61026 200 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PRKAA1Q13131 559 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 CEACAM7Q14002 265 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ZNF789Q5FWF6 425 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ZNF470Q6ECI4 717 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ANKRD23Q86SG2 305 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 TMEM86AQ8N2M4 240 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 SNX31Q8N9S9 440 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 GPR78Q96P69 363 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 NPAS2Q99743 824 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 EPB41L1Q9H4G0 881 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 NEU3Q9UQ49 428 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 CDYLQ9Y232 598 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 MYADML2A6NDP7 307 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 APOA4P06727 396 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 STMN1P16949 149 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 ALDH1A3P47895 512 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 PLK1P53350 603 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 C16orf89Q6UX73 402 aa15.3■□□□□ 0.04
CSDC2-201ENST00000306149 AGMOQ6ZNB7 445 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms