RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 LRRC52Q8N7C0 313 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 TRPC4APQ8TEL6 797 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 SKA1Q96BD8 255 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 NXNL1Q96CM4 212 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 LPIN3Q9BQK8 851 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 OSBPL11Q9BXB4 747 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PDZD7Q9H5P4 517 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 CACYBPQ9HB71 228 aaKnown RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 EIF3LQ9Y262 564 aaKnown RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 MYH1P12882 1939 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 MYH4Q9Y623 1939 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 DAB1O75553 588 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 MYO1DO94832 1006 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 LINGO3P0C6S8 592 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 IRF1P10914 325 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 OVOS1Q6IE37 1185 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 OTOP3Q7RTS5 596 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PATL1Q86TB9 770 aaKnown RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 HORMAD1Q86X24 394 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 STRA6Q9BX79 667 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 SPATA16Q9BXB7 569 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 STK39Q9UEW8 545 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PCDHGB4Q9UN71 923 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 FARP1Q9Y4F1 1045 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 EVPLLA8MZ36 301 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 KLF11O14901 512 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 CHRNGP07510 517 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 MBTD1Q05BQ5 628 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 TEX44Q53QW1 395 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 LRRC8DQ7L1W4 858 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 CENPLQ8N0S6 344 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 EZH1Q92800 747 aaPredicted RBP13.43□□□□□ -0.26
DDX54-201ENST00000306014 FBXO32Q969P5 355 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 POLR1BQ9H9Y6 1135 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 PNPLA3Q9NST1 481 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 GALNT8Q9NY28 637 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 VPS9D1Q9Y2B5 631 aa13.43□□□□□ -0.26
DDX54-201ENST00000306014 SLC12A8A0AV02 714 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 AMHP03971 560 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 LBPP18428 481 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 ICAM3P32942 547 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 CCNFP41002 786 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 MAXP61244 160 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 SLC9B1Q4ZJI4 515 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 UBR7Q8N806 425 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 ACOX2Q99424 681 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 VTA1Q9NP79 307 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 DMTF1Q9Y222 760 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 BTRCQ9Y297 605 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 MTF2Q9Y483 593 aaPredicted RBP13.42□□□□□ -0.26
DDX54-201ENST00000306014 PKD1L3Q7Z443 1732 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 SERPINB1P30740 379 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 AKT1P31749 480 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 THPOP40225 353 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 PTPN9P43378 593 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 GALK1P51570 392 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 RAP1GDS1P52306 607 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 BFSP2Q13515 415 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 FAM98BQ52LJ0 330 aaKnown RBP13.42□□□□□ -0.26
DDX54-201ENST00000306014 C9orf57Q5W0N0 161 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 TMEM198Q66K66 360 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 SCIMPQ6UWF3 145 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 HERC6Q8IVU3 1022 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 PGAM4Q8N0Y7 254 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 KLRG1Q96E93 195 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 BTBD9Q96Q07 612 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 DUSP16Q9BY84 665 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 RAMP2O60895 175 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 SERPINF2P08697 491 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 S100A5P33763 92 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 CD86P42081 329 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 DNAJC1Q96KC8 554 aaKnown RBP13.42□□□□□ -0.26
DDX54-201ENST00000306014 TAS2R13Q9NYV9 303 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 RGS17Q9UGC6 210 aaPredicted RBP13.42□□□□□ -0.26
DDX54-201ENST00000306014 ANAPC2Q9UJX6 822 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 TJP1Q07157 1748 aa13.42□□□□□ -0.26
DDX54-201ENST00000306014 BTN3A1O00481 513 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 CRTAMO95727 393 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 AP2A1O95782 977 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 HGFP14210 728 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 RECQLP46063 649 aaPredicted RBP13.41□□□□□ -0.26
DDX54-201ENST00000306014 IL5RAQ01344 420 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 VAC14Q08AM6 782 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 DLG1Q12959 904 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 SEMA5AQ13591 1074 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 CCDC92Q53HC0 331 aaPredicted RBP13.41□□□□□ -0.26
DDX54-201ENST00000306014 CACHD1Q5VU97 1274 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 CGB2Q6NT52 195 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 TLDC1Q6P9B6 456 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 FRMD7Q6ZUT3 714 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 SNX31Q8N9S9 440 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 METTL6Q8TCB7 284 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 LZICQ8WZA0 190 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 EIF2AQ9BY44 585 aaKnown RBP13.41□□□□□ -0.26
DDX54-201ENST00000306014 LIMD1Q9UGP4 676 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 PLCH1Q4KWH8 1693 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 COL18A1P39060 1754 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 DHRS12A0PJE2 317 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 NRP2O60462 931 aa13.41□□□□□ -0.26
DDX54-201ENST00000306014 SLC2A4P14672 509 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms