RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 TMEM169Q96HH4 297 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PAWRQ96IZ0 340 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 NDNQ99608 321 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PLCD4Q9BRC7 762 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 SLC25A51Q9H1U9 297 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 SUDS3Q9H7L9 328 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 ENTPD7Q9NQZ7 604 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 KLC4Q9NSK0 619 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PPARGC1AQ9UBK2 798 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 MTF2Q9Y483 593 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 UNC80Q8N2C7 3258 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 A0A0U1RQS6 177 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 DRGXA6NNA5 263 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PRRG1O14668 218 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 ACSL4O60488 711 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 HAUS5O94927 633 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PROCP04070 461 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 GSTA1P08263 222 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 FGF3P11487 239 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 CORO1AP31146 461 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 SLC1A2P43004 574 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 CCR10P46092 362 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 ARCN1P48444 511 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 AQP5P55064 265 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 ELF3P78545 371 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 OCRLQ01968 901 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 TWF1Q12792 350 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 SERINC3Q13530 473 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 BTG3Q14201 252 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 LRRC26Q2I0M4 334 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 HECTD3Q5T447 861 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 MBLAC2Q68D91 279 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 ZNF470Q6ECI4 717 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 PTAR1Q7Z6K3 402 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 GPATCH11Q8N954 259 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 IMP4Q96G21 291 aaKnown RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 PRICKLE1Q96MT3 831 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 EBF4Q9BQW3 602 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 TBX21Q9UL17 535 aa11.53□□□□□ -0.56
SCG2-201ENST00000305409 FNDC1Q4ZHG4 1894 aaPredicted RBP11.53□□□□□ -0.56
SCG2-201ENST00000305409 SLC4A1P02730 911 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 NQO1P15559 274 aaKnown RBP11.52□□□□□ -0.56
SCG2-201ENST00000305409 TUFMP49411 452 aaKnown RBP11.52□□□□□ -0.56
SCG2-201ENST00000305409 HARS2P49590 506 aaKnown RBP11.52□□□□□ -0.56
SCG2-201ENST00000305409 SERPINB8P50452 374 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 LBRQ14739 615 aaKnown RBP11.52□□□□□ -0.56
SCG2-201ENST00000305409 PTPRRQ15256 657 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 ATG16L1Q676U5 607 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 CEP97Q8IW35 865 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 ZNF461Q8TAF7 563 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 ARRDC2Q8TBH0 407 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 NSMCE3Q96MG7 304 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 SHCBP1LQ9BZQ2 653 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 PNPOQ9NVS9 261 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 MKS1Q9NXB0 559 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 DCDC2Q9UHG0 476 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 DNAJC16Q9Y2G8 782 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 YIPF1Q9Y548 306 aa11.52□□□□□ -0.56
SCG2-201ENST00000305409 TK2O00142 265 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 PSMD3O43242 534 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 DCTN3O75935 186 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 UNC5CO95185 931 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 RGRP47804 291 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 ALDH1A3P47895 512 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 CPA2P48052 419 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 ARSDP51689 593 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 THOC5Q13769 683 aaKnown RBP11.52□□□□□ -0.57
SCG2-201ENST00000305409 SIRPB2Q5JXA9 342 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 PDPK2PQ6A1A2 396 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 CNSTQ6PJW8 725 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 LINGO4Q6UY18 593 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 NAPRTQ6XQN6 538 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 KYAT3Q6YP21 454 aaKnown RBP11.52□□□□□ -0.57
SCG2-201ENST00000305409 CLNKQ7Z7G1 428 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 OR6P1Q8NGX9 317 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 BLOC1S5Q8TDH9 187 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 ACMSDQ8TDX5 336 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 NSMCE1Q8WV22 266 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 KCTD4Q8WVF5 259 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 TOP1MTQ969P6 601 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 FAM136AQ96C01 138 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 NMUR2Q9GZQ4 415 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 ARL8BQ9NVJ2 186 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 SAGE1Q9NXZ1 904 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 COPG2Q9UBF2 871 aa11.52□□□□□ -0.57
SCG2-201ENST00000305409 TRIM43BA6NCK2 446 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 STC2O76061 302 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 EFEMP2O95967 443 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SOD2P04179 222 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SLC1A6P48664 564 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 SERPINH1P50454 418 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 NAB1Q13506 487 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 ZNF235Q14590 738 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 EML3Q32P44 896 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 RBM20Q5T481 1227 aaKnown RBP11.51□□□□□ -0.57
SCG2-201ENST00000305409 VWA5B1Q5TIE3 1220 aa11.51□□□□□ -0.57
SCG2-201ENST00000305409 TXNDC8Q6A555 127 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms