RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 CAAP1Q9H8G2 361 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 PREBQ9HCU5 417 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 PCSK1NQ9UHG2 260 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 PCOLCE2Q9UKZ9 415 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
CLCC1-201ENST00000302500 PCDHGB2Q9Y5G2 931 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 FADS3Q9Y5Q0 445 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 BPTFQ12830 3046 aa11.45□□□□□ -0.58
CLCC1-201ENST00000302500 FAM221BA6H8Z2 402 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 LRRC72A6NJI9 287 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 H0Y8X5 98 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 INSIG1O15503 277 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CREB3O43889 395 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 PCDHGA12O60330 932 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 TOP3BO95985 862 aaKnown RBP11.44□□□□□ -0.58
CLCC1-201ENST00000302500 PRNPP04156 253 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CAPNS1P04632 268 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 SYPP08247 313 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CD48P09326 243 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 GIMD1P0DJR0 217 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 ADRB3P13945 408 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 GNSP15586 552 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CR2P20023 1033 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 TPM4P67936 248 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 IHHQ14623 411 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 TDRD12Q587J7 1177 aaKnown RBP11.44□□□□□ -0.58
CLCC1-201ENST00000302500 LEKR1Q6ZMV7 388 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 ERN2Q76MJ5 926 aaKnown RBP11.44□□□□□ -0.58
CLCC1-201ENST00000302500 DSG4Q86SJ6 1040 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 SLC22A18ASQ8N1D0 253 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 NETO2Q8NC67 525 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 DEFB124Q8NES8 71 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 OR8K1Q8NGG5 319 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 GRIN3AQ8TCU5 1115 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CASKIN2Q8WXE0 1202 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 FAF2Q96CS3 445 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 LRIG1Q96JA1 1093 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 CSPG4P5Q96PW8 444 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 HEPHQ9BQS7 1158 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 NUP85Q9BW27 656 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 TM6SF2Q9BZW4 377 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 DHX35Q9H5Z1 703 aaKnown RBP11.44□□□□□ -0.58
CLCC1-201ENST00000302500 PCDH18Q9HCL0 1135 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 MRPL47Q9HD33 250 aaKnown RBP11.44□□□□□ -0.58
CLCC1-201ENST00000302500 GGT7Q9UJ14 662 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 NCKAP1Q9Y2A7 1128 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 BTBD3Q9Y2F9 522 aa11.44□□□□□ -0.58
CLCC1-201ENST00000302500 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.44□□□□□ -0.583e-9■■□□□ 13.6
CLCC1-201ENST00000302500 LOC400499M0QZD8 3231 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 A0A1B0GTQ1 180 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ZSCAN5CA6NGD5 496 aaPredicted RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 C1QTNF3-AMACRE9PGA6 284 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 RAD51BO15315 384 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 SH3BP5O60239 455 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 MAFKO60675 156 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 LCA5LO95447 670 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ZNF135P52742 658 aaPredicted RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 NXPH1P58417 271 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 TAS2R40P59535 323 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 TPI1P60174 286 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 TRIM14Q14142 442 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 PIGHQ14442 188 aaPredicted RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 MYLK3Q32MK0 819 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ATP13A4Q4VNC1 1196 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ATXN7L2Q5T6C5 722 aaPredicted RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 SEL1L3Q68CR1 1132 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 NAPEPLDQ6IQ20 393 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 GCNT7Q6ZNI0 430 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ABI3BPQ7Z7G0 1075 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 IQCHQ86VS3 1027 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 OR6K2Q8NGY2 324 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 ECHDC3Q96DC8 303 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 GTPBP2Q9BX10 602 aaKnown RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 C1QTNF2Q9BXJ5 285 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 CPEB1Q9BZB8 566 aaKnown RBP11.43□□□□□ -0.58
CLCC1-201ENST00000302500 GAREM1Q9H706 876 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 CATSPERBQ9H7T0 1116 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 MYO1AQ9UBC5 1043 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 DMTF1Q9Y222 760 aa11.43□□□□□ -0.58
CLCC1-201ENST00000302500 TDRD6O60522 2096 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 C3orf70A6NLC5 250 aaPredicted RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 C16orf96A6NNT2 1141 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 EEF2KO00418 725 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 KPNA3O00505 521 aaPredicted RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 TRAFD1O14545 582 aaPredicted RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 KCNK3O14649 394 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 OPHN1O60890 802 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 PROSCO94903 275 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 GM2AP17900 193 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 CD38P28907 300 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 NUDT1P36639 197 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 RXRGP48443 463 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 CSNK1DP48730 415 aa11.42□□□□□ -0.58
CLCC1-201ENST00000302500 PAPOLAP51003 745 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 NOVA1P51513 510 aaKnown RBP11.42□□□□□ -0.58
CLCC1-201ENST00000302500 NEK3P51956 506 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms