RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 TRHDEQ9UKU6 1024 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 PLA2G4CQ9UP65 541 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 WASF2Q9Y6W5 498 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 ATG2BQ96BY7 2078 aa9.62□□□□□ -0.87
RFX3-201ENST00000302303 TCRBV7S3A2A0A539 114 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CTAGE15A4D2H0 777 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CHURC1-FNTBB4DL54 471 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 TRAFD1O14545 582 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 RIOK3O14730 519 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 OPHN1O60890 802 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SIN3BO75182 1162 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 KLF8O95600 359 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 MT-CYBP00156 380 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 GSRP00390 522 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 IFNB1P01574 187 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 KRT14P02533 472 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CTAGE8P0CG41 777 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 PSMB4P28070 264 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 NTSR1P30989 418 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 METAP1P53582 386 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 COPAP53621 1224 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 DR1Q01658 176 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 OLIG2Q13516 323 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 PTK6Q13882 451 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 MYLK3Q32MK0 819 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 ACCSLQ4AC99 568 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CARD16Q5EG05 197 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 DUPD1Q68J44 220 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 KDELC1Q6UW63 502 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CTAGE6Q86UF2 777 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 ZSWIM9Q86XI8 627 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CTAGE4Q8IX94 777 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 TXNDC5Q8NBS9 432 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 OR6K2Q8NGY2 324 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 RPLP0P6Q8NHW5 317 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SEC14L1Q92503 715 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SHDQ96IW2 340 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 NELL2Q99435 816 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SEMA3CQ99985 751 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 HINFPQ9BQA5 517 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SLC25A51Q9H1U9 297 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 GBA3Q9H227 469 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 ETNK1Q9HBU6 452 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 PCDH9Q9HC56 1237 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 EVLQ9UI08 416 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 SARDHQ9UL12 918 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CKAP5Q14008 2032 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 TARSL2A2RTX5 802 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 F5H423 210 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 NPC1O15118 1278 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 FZD6O60353 706 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 ECEL1O95672 775 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 ADRA1AP35348 466 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 MAGEA6P43360 314 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SCNN1BP51168 640 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CCNHP51946 323 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 RHOAP61586 193 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SLC7A5Q01650 507 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 LMNB2Q03252 620 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 MSLNQ13421 630 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 SEMA5AQ13591 1074 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 DHX34Q14147 1143 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 UBXN2BQ14CS0 331 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 PARP6Q2NL67 630 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 FNDC3BQ53EP0 1204 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 FAXCQ5TGI0 409 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 DENND5AQ6IQ26 1287 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SERPINA13PQ6UXR4 307 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 NUDT18Q6ZVK8 323 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SRLQ86TD4 932 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 CHPFQ8IZ52 775 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 STK40Q8N2I9 435 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 SYNPOQ8N3V7 929 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 TAB3Q8N5C8 712 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFX3-201ENST00000302303 MNS1Q8NEH6 495 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 UCMAQ8WVF2 138 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CPT1BQ92523 772 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 MRGPRX2Q96LB1 330 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 CCDC114Q96M63 670 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 TRIB3Q96RU7 358 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 RBM15Q96T37 977 aaKnown RBP eCLIP9.61□□□□□ -0.87
RFX3-201ENST00000302303 CINPQ9BW66 212 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 CPEB1Q9BZB8 566 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 POLR1EQ9GZS1 481 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 MKRN2Q9H000 416 aaKnown RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 UBP1Q9NZI7 540 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 KLHL8Q9P2G9 620 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 FEZ2Q9UHY8 353 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 PPM1HQ9ULR3 514 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 MMP17Q9ULZ9 603 aa9.61□□□□□ -0.87
RFX3-201ENST00000302303 FARP1Q9Y4F1 1045 aaPredicted RBP9.61□□□□□ -0.87
RFX3-201ENST00000302303 TTC28Q96AY4 2481 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 NCOR1O75376 2440 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 EDDM13A0A1B0GTR0 161 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 LOC285095A0A1B0GVY8 99 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 FAM187AA6NFU0 413 aa9.6□□□□□ -0.87
RFX3-201ENST00000302303 HTRA2O43464 458 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms