RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 CXCR3P49682 368 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 MARSP56192 900 aaKnown RBP6.59□□□□□ -1.35
ITGB1-201ENST00000302278 ZSCAN23Q3MJ62 389 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 TMEM52BQ4KMG9 183 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 BORAQ6PGQ7 559 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 PARS2Q7L3T8 475 aaKnown RBP6.59□□□□□ -1.35
ITGB1-201ENST00000302278 B3GNT8Q7Z7M8 397 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 RNF34Q969K3 372 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 RBM15Q96T37 977 aaKnown RBP eCLIP6.59□□□□□ -1.351e-6■■□□□ 12.5
ITGB1-201ENST00000302278 UPF2Q9HAU5 1272 aaKnown RBP6.59□□□□□ -1.35
ITGB1-201ENST00000302278 DKK3Q9UBP4 350 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 APOBEC3BQ9UH17 382 aaKnown RBP6.59□□□□□ -1.35
ITGB1-201ENST00000302278 MFHAS1Q9Y4C4 1052 aa6.59□□□□□ -1.35
ITGB1-201ENST00000302278 CAPN5O15484 640 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 LEFTY1O75610 366 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 FAM87AP0C7U9 286 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CCR10P46092 362 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 RGS7P49802 495 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 B4GALNT1Q00973 533 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 LRRC63Q05C16 580 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 PDE1CQ14123 709 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 HLTFQ14527 1009 aaKnown RBP eCLIP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 DEFB133Q30KQ1 61 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 MANEAQ5SRI9 462 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ARCQ7LC44 396 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 KYQ8NBH2 561 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CHST14Q8NCH0 376 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CCDC74AQ96AQ1 378 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CAAP1Q9H8G2 361 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 LOXL2Q9Y4K0 774 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CETN3O15182 167 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 HSF2BPO75031 334 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 FMO5P49326 533 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CCL7P80098 99 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CENPCQ03188 943 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 SRSF6Q13247 344 aaKnown RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 TRA2AQ13595 282 aaKnown RBP eCLIP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 MAP7Q14244 749 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CERCAMQ5T4B2 595 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 OLFML1Q6UWY5 402 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CIR1Q86X95 450 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 LMX1AQ8TE12 382 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 GFM1Q96RP9 751 aaKnown RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 IL12RB2Q99665 862 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 HEPHQ9BQS7 1158 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 EDEM3Q9BZQ6 932 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CFAP45Q9UL16 551 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 HECTD1Q9ULT8 2610 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 I6L893 689 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 SMAD6O43541 496 aaKnown RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 MT-CO1P00395 513 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 F13A1P00488 732 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ANXA6P08133 673 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 GLB1P16278 677 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ZNF18P17022 549 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 BRD2P25440 801 aaKnown RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ABL2P42684 1182 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 BLKP51451 505 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 POLE2P56282 527 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 RP1P56715 2156 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 PITX1P78337 314 aaPredicted RBP6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ELOCQ15369 112 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CARD16Q5EG05 197 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ARSIQ5FYB1 569 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 MANEALQ5VSG8 457 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 TMEM270Q6UE05 265 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 DPY19L3Q6ZPD9 716 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 SLC26A9Q7LBE3 791 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 SPRED1Q7Z699 444 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ZDHHC17Q8IUH5 632 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CEP63Q96MT8 703 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 NPY6RQ99463 290 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 DYRK4Q9NR20 520 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 FOXJ2Q9P0K8 574 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 NEU3Q9UQ49 428 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 CEP83Q9Y592 693 aa6.58□□□□□ -1.36
ITGB1-201ENST00000302278 ASXL3Q9C0F0 2248 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 MED7O43513 233 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 NUDT21O43809 227 aaKnown RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 ZSCAN22P10073 491 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 CD19P15391 556 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 ARSDP51689 593 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 ADKP55263 362 aaKnown RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 KIAA1024LP59773 190 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 ARF5P84085 180 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 FKBP3Q00688 224 aaKnown RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 PDCLQ13371 301 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 POM121L1PQ3SYA9 428 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 ZNF805Q5CZA5 627 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 EFHC2Q5JST6 749 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 EFHC1Q5JVL4 640 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 OR6B2Q6IFH4 312 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 DENND1BQ6P3S1 775 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 CCDC47Q96A33 483 aaKnown RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 DPYSL5Q9BPU6 564 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 TCEAL2Q9H3H9 227 aaPredicted RBP6.57□□□□□ -1.36
ITGB1-201ENST00000302278 VPS28Q9UK41 221 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 KNTC1P50748 2209 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 CPED1A4D0V7 1026 aa6.57□□□□□ -1.36
ITGB1-201ENST00000302278 M0QYT0 321 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms