RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 SLC36A3Q495N2 470 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GALNT18Q6P9A2 607 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 KCTD8Q6ZWB6 473 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TRIM50Q86XT4 487 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SCUBE3Q8IX30 993 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CCDC185Q8N715 623 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 KCTD4Q8WVF5 259 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 STON2Q8WXE9 905 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 UNKQ9C0B0 810 aaKnown RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PALMDQ9NP74 551 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GGA3Q9NZ52 723 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CCDC167Q9P0B6 97 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SEPT10Q9P0V9 454 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ITGB1BP2Q9UKP3 347 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 FIS1Q9Y3D6 152 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SNX9Q9Y5X1 595 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PSME4Q14997 1843 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF487B1APH4 448 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 DLX3O60479 287 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TPST1O60507 370 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GABBR2O75899 941 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 IL18RAPO95256 599 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PRKCBP05771 671 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 VDRP11473 427 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 MATN1P21941 496 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CSRP3P50461 194 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GRM3Q14832 879 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SURF1Q15526 300 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TSTD2Q5T7W7 516 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 EEF1DP3Q658K8 133 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 XRRA1Q6P2D8 792 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 IGFN1Q86VF2 1251 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 OR9I1Q8NGQ6 314 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 MCMBPQ9BTE3 642 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 EFHD1Q9BUP0 239 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SOX17Q9H6I2 414 aaPredicted RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PIM2Q9P1W9 311 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 USP3Q9Y6I4 520 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 KRBA1A5PL33 1030 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TARM1B6A8C7 271 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CFAP99D6REC4 459 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SPTLC1O15269 473 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 B4GALT5O43286 388 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SNAP91O60641 907 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CLASP2O75122 1294 aaKnown RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CABYRO75952 493 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 OXSR1O95747 527 aaPredicted RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ASNSP08243 561 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 POLR2IP36954 125 aaKnown RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 AVPR1AP37288 418 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SLC7A2P52569 658 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 NDST1P52848 882 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 PPP1R3AQ16821 1122 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 FAM117BQ6P1L5 589 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 SLC2A7Q6PXP3 512 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF354CQ86Y25 554 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TP53INP2Q8IXH6 220 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CENPLQ8N0S6 344 aaPredicted RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF567Q8N184 647 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 FSTL5Q8N475 847 aaPredicted RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CXorf38Q8TB03 319 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 STYXQ8WUJ0 223 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TRUB1Q8WWH5 349 aaKnown RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 CYGBQ8WWM9 190 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 MPHOSPH6Q99547 160 aaKnown RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 RIC8BQ9NVN3 520 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 ARMC1Q9NVT9 282 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM181Q9P2C4 612 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 XPR1Q9UBH6 696 aa11.01□□□□□ -0.65
ZNF558-201ENST00000301475 GPC6Q9Y625 555 aaPredicted RBP11.01□□□□□ -0.65
ZNF558-201ENST00000301475 COL11A1P12107 1806 aaPredicted RBP11□□□□□ -0.65
ZNF558-201ENST00000301475 SLCO1B7G3V0H7 640 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 ITGADQ13349 1161 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 FASTKQ14296 549 aaKnown RBP11□□□□□ -0.65
ZNF558-201ENST00000301475 ZNF460Q14592 562 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 GOLGA7BQ2TAP0 167 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 AGKQ53H12 422 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 INTS11Q5TA45 600 aaKnown RBP11□□□□□ -0.65
ZNF558-201ENST00000301475 TMEM135Q86UB9 458 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 DHFR2Q86XF0 187 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 CCNYL1Q8N7R7 359 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 OR2T34Q8NGX1 318 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 OR2T3Q8NH03 318 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 CLEC4CQ8WTT0 213 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 TAMM41Q96BW9 452 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 ATG4CQ96DT6 458 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 SCYL1Q96KG9 808 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 TNFRSF12AQ9NP84 129 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 GID8Q9NWU2 228 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 MID2Q9UJV3 735 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 AURKCQ9UQB9 309 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 TSC22D4Q9Y3Q8 395 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 TCAF1Q9Y4C2 921 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 MRASO14807 208 aa11□□□□□ -0.65
ZNF558-201ENST00000301475 AQP9O43315 295 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms