RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CPXCR1Q8N123 301 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 ITPKCQ96DU7 683 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 ZNF486Q96H40 463 aaPredicted RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 CGREF1Q99674 301 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 IRF2BPLQ9H1B7 796 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 SNX15Q9NRS6 342 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 ZNF219Q9P2Y4 722 aaPredicted RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 ATAD5Q96QE3 1844 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 SYNJ2BP-COX16A0A087WUM0 186 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 INPP4BO15327 924 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 BCAR1P56945 870 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 SPP2Q13103 211 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 IL31RAQ8NI17 732 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 NDNFQ8TB73 568 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 UBA3Q8TBC4 463 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 HDAC2Q92769 488 aaKnown RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 PIWIL1Q96J94 861 aaKnown RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 PEBP4Q96S96 227 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 FBRSL1Q9HCM7 1045 aaKnown RBP14.59□□□□□ -0.07
CDT1-201ENST00000301019 COX16Q9P0S2 106 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 SLC39A10Q9ULF5 831 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 LTBP1Q14766 1721 aa14.59□□□□□ -0.07
CDT1-201ENST00000301019 HEATR9A2RTY3 570 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 TBX3O15119 743 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 NDUFB10O96000 172 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 KRT19P08727 400 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 SPNP16150 400 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 DCKP27707 260 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 IFNA8P32881 189 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 IL1RL1Q01638 556 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 ACAP2Q15057 778 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 DHFR2Q86XF0 187 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 TP53I13Q8NBR0 393 aaPredicted RBP14.58□□□□□ -0.07
CDT1-201ENST00000301019 OR7G1Q8NGA0 311 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 RP9Q8TA86 221 aaKnown RBP14.58□□□□□ -0.07
CDT1-201ENST00000301019 ZC3H12CQ9C0D7 883 aaKnown RBP14.58□□□□□ -0.07
CDT1-201ENST00000301019 SCHIP1Q9P0W5 487 aaPredicted RBP14.58□□□□□ -0.07
CDT1-201ENST00000301019 USP18Q9UMW8 372 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 CDYLQ9Y232 598 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 PMF1-BGLAPU3KQ54 211 aa14.58□□□□□ -0.07
CDT1-201ENST00000301019 APOC4-APOC2K7ER74 178 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 DLGAP1O14490 977 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 ASNA1O43681 348 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 SNAP91O60641 907 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 BCAS1O75363 584 aaPredicted RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 VNN1O95497 513 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 APOC2P02655 101 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 NAT2P11245 290 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 PPP4CP60510 307 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 RHDQ02161 417 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 DMP1Q13316 513 aaPredicted RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 TJAP1Q5JTD0 557 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 CATSPEREQ5SY80 951 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 ANKRD34AQ69YU3 496 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 FAM117BQ6P1L5 589 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 CRYGNQ8WXF5 182 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 TTYH2Q9BSA4 534 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 SLC7A5P2Q9GIP4 190 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 BPTFQ12830 3046 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 A0A096LPK6 155 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 MGEA5O60502 916 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 SCO1O75880 301 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 ACO1P21399 889 aaKnown RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 CXCR2P25025 360 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 PLA2G16P53816 162 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 GCNT1Q02742 428 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 SLC25A11Q02978 314 aaKnown RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 PAGE2Q7Z2X7 111 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 C11orf74Q86VG3 221 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 ANKRD13BQ86YJ7 626 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.58□□□□□ -0.08
CDT1-201ENST00000301019 THNSL1Q8IYQ7 743 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 SLC22A15Q8IZD6 547 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 CADM2Q8N3J6 435 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 WDTC1Q8N5D0 677 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 FNIP1Q8TF40 1166 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 OSCP1Q8WVF1 389 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 RXFP2Q8WXD0 754 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 VTI1AQ96AJ9 217 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 EBNA1BP2Q99848 306 aaKnown RBP14.58□□□□□ -0.08
CDT1-201ENST00000301019 FUNDC2Q9BWH2 189 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 FAM49BQ9NUQ9 324 aa14.58□□□□□ -0.08
CDT1-201ENST00000301019 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 M0R3G1 203 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 INMTO95050 263 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 RGS7P49802 495 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 GBE1Q04446 702 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 HABP4Q5JVS0 413 aaKnown RBP14.57□□□□□ -0.08
CDT1-201ENST00000301019 NEK5Q6P3R8 708 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 RSBN1LQ6PCB5 846 aaPredicted RBP14.57□□□□□ -0.08
CDT1-201ENST00000301019 ABRAXAS1Q6UWZ7 409 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 ADCK1Q86TW2 530 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 FAM20CQ8IXL6 584 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 SYTL1Q8IYJ3 562 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 DHRSXQ8N5I4 330 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 OTUD5Q96G74 571 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 SIGLEC10Q96LC7 697 aa14.57□□□□□ -0.08
CDT1-201ENST00000301019 SH3GL1Q99961 368 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms