RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 BTBD19C9JJ37 291 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 KPNA5O15131 536 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 BANF1O75531 89 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 IFNGR2P38484 337 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 MAGEA10P43363 369 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-201ENST00000293441 ZNHIT3Q15649 155 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-201ENST00000293441 LYPLAL1Q5VWZ2 237 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 GOLGA2P5Q9HBQ8 144 aa17.46■□□□□ 0.39
SHANK1-201ENST00000293441 KDM4FA0A1W2PPD8 638 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 ISM1B1AKI9 464 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 BIKQ13323 160 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 CEP68Q76N32 757 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 C16orf62Q7Z3J2 963 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 OR8D1Q8WZ84 308 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 CERS2Q96G23 380 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 DUSP16Q9BY84 665 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 GDF3Q9NR23 364 aa17.46■□□□□ 0.38
SHANK1-201ENST00000293441 AGO1Q9UL18 857 aaKnown RBP17.46■□□□□ 0.38
SHANK1-201ENST00000293441 NTRK1P04629 796 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 HOXB8P17481 243 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TKTP29401 623 aaKnown RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 POLD2P49005 469 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 FRG1Q14331 258 aaKnown RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 LRRC39Q96DD0 335 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 PDP2Q9P2J9 529 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 A0A1W2PQH9 124 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 CXCR2P25025 360 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 RXRGP48443 463 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TBX2Q13207 712 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 MSLNQ13421 630 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TMPRSS6Q8IU80 811 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 PTGR2Q8N8N7 351 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 DNAJC19Q96DA6 116 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 BTBD10Q9BSF8 475 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 PCDH12Q9NPG4 1184 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 PSME2Q9UL46 239 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 LDLRP01130 860 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TALDO1P37837 337 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 STK32CQ86UX6 486 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 DSELQ8IZU8 1212 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 HDHD2Q9H0R4 259 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 EPS8L2Q9H6S3 715 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 MORF4L1Q9UBU8 362 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 DDX20Q9UHI6 824 aaKnown RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 ADAM28Q9UKQ2 775 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 ZNF232Q9UNY5 417 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 SMIM35A0A1B0GVV1 85 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 DNTTP04053 509 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TSPAN8P19075 237 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 RPL14P50914 215 aaKnown RBP17.45■□□□□ 0.38
SHANK1-201ENST00000293441 C16orf72Q14CZ0 275 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 SLC30A9Q6PML9 568 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 TOP6BLQ8N6T0 577 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 STMN3Q9NZ72 180 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 CCDC189A1A4V9 331 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 JAK1P23458 1154 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 LRPAP1P30533 357 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 KCNA10Q16322 511 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 GPAT3Q53EU6 434 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 NEK10Q6ZWH5 1172 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 UBE2E3Q969T4 207 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 PRDM12Q9H4Q4 367 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
SHANK1-201ENST00000293441 LRRC14BA6NHZ5 514 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 MAGEC1O60732 1142 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 CDC25CP30307 473 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 XKR6Q5GH73 641 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 FAM151BQ6UXP7 276 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 ALLCQ8N6M5 410 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 C19orf18Q8NEA5 215 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 GPR156Q8NFN8 814 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 ATL1Q8WXF7 558 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 CDRT15Q96T59 188 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 RNPEPQ9H4A4 650 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 H3BQF6 201 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 COPZ1P61923 177 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 FMO1Q01740 532 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 STX4Q12846 297 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 MEA1Q16626 185 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TRMT5Q32P41 509 aaKnown RBP17.44■□□□□ 0.38
SHANK1-201ENST00000293441 ANKRD23Q86SG2 305 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 ZC3H7AQ8IWR0 971 aaKnown RBP17.44■□□□□ 0.38
SHANK1-201ENST00000293441 CERS4Q9HA82 394 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 CFAP97Q9P2B7 532 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 PTCH2Q9Y6C5 1203 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 UQCRBP14927 111 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 ADRA1DP25100 572 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 PTPRNQ16849 979 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TRIM16LQ309B1 348 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 PLA2G4EQ3MJ16 856 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 SNAP47Q5SQN1 464 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 CRTC3Q6UUV7 619 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 KRT73Q86Y46 540 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3DA0A087WVF3 549 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3IA0A087WXS9 549 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3EA0A087X179 549 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3KA0A087X1G2 549 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3FA6NER0 549 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-201ENST00000293441 TBC1D3LB9A6J9 549 aa17.44■□□□□ 0.38
SHANK1-201ENST00000293441 HIST1H2ABP04908 130 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms