RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 ATRXP46100 2492 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 CYP4F3Q08477 520 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 PPP1R15BQ5SWA1 713 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 FBXL19Q6PCT2 694 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 PLPP6Q8IY26 295 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 AOPEPQ8N6M6 819 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 ANKRD20A12PQ8NF67 263 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 BAP1Q92560 729 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 CALN1Q9BXU9 219 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 KLC2Q9H0B6 622 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 SEPT11Q9NVA2 429 aaKnown RBP25.67■■□□□ 1.7
U2AF1-201ENST00000291552 KLHL11Q9NVR0 708 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 GGT7Q9UJ14 662 aa25.67■■□□□ 1.7
U2AF1-201ENST00000291552 SIGLEC6O43699 453 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 AP1G1O43747 822 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 RAMP2O60895 175 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 GIMD1P0DJR0 217 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 DGKAP23743 735 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 RPL7AP62424 266 aaKnown RBP25.66■■□□□ 1.7
U2AF1-201ENST00000291552 C1QBPQ07021 282 aaKnown RBP25.66■■□□□ 1.7
U2AF1-201ENST00000291552 DNAJC24Q6P3W2 148 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 C19orf48Q6RUI8 117 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 PDCD7Q8N8D1 485 aaKnown RBP25.66■■□□□ 1.7
U2AF1-201ENST00000291552 SYT11Q9BT88 431 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 ITM2BQ9Y287 266 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 LOC400499M0QZD8 3231 aa25.66■■□□□ 1.7
U2AF1-201ENST00000291552 GSRP00390 522 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 HOXB3P14651 431 aaPredicted RBP25.65■■□□□ 1.7
U2AF1-201ENST00000291552 CKMT2P17540 419 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 ZNF143P52747 638 aaPredicted RBP25.65■■□□□ 1.7
U2AF1-201ENST00000291552 OGDHQ02218 1023 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 POLD3Q15054 466 aaPredicted RBP25.65■■□□□ 1.7
U2AF1-201ENST00000291552 CCDC183Q5T5S1 534 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 ATXN7L2Q5T6C5 722 aaPredicted RBP25.65■■□□□ 1.7
U2AF1-201ENST00000291552 HES3Q5TGS1 186 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 KIAA1161Q6NSJ0 714 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 SLFN11Q7Z7L1 901 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 OR2AP1Q8NGE2 309 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 BMFQ96LC9 184 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 MCEEQ96PE7 176 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 SLC17A9Q9BYT1 436 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 ASXL3Q9C0F0 2248 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 ANKRD36A6QL64 1941 aa25.65■■□□□ 1.7
U2AF1-201ENST00000291552 POM121BA6NF01 834 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 C16orf96A6NNT2 1141 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 KDELR3O43731 214 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 PIAS2O75928 621 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 RPS21P63220 83 aaKnown RBP25.64■■□□□ 1.7
U2AF1-201ENST00000291552 TYRO3Q06418 890 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 KDM7AQ6ZMT4 941 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 RTL3Q8N8U3 475 aaKnown RBP25.64■■□□□ 1.7
U2AF1-201ENST00000291552 NETO2Q8NC67 525 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 KLF6Q99612 283 aaPredicted RBP25.64■■□□□ 1.7
U2AF1-201ENST00000291552 TAS2R14Q9NYV8 317 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 FZD10Q9ULW2 581 aa25.64■■□□□ 1.7
U2AF1-201ENST00000291552 A6NNZ2 444 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 TEX33O43247 280 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 PAK4O96013 591 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 UGT2B4P06133 528 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 CDK11BP21127 795 aaKnown RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 GEMIN4P57678 1058 aaKnown RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 ZNF805Q5CZA5 627 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 TPRG1LQ5T0D9 272 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 KYAT3Q6YP21 454 aaKnown RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 Q6ZSR6 202 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 IRF2BP2Q7Z5L9 587 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 PTAR1Q7Z6K3 402 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 MCOLN2Q8IZK6 566 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 RYBPQ8N488 228 aaPredicted RBP25.63■■□□□ 1.69
U2AF1-201ENST00000291552 OR4C6Q8NH72 309 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 FEM1CQ96JP0 617 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 C1QTNF2Q9BXJ5 285 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 HS3ST3A1Q9Y663 406 aa25.63■■□□□ 1.69
U2AF1-201ENST00000291552 COL27A1Q8IZC6 1860 aaPredicted RBP25.62■■□□□ 1.69
U2AF1-201ENST00000291552 KRIT1O00522 736 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 FFAR2O15552 330 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 TMCC1O94876 653 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 CDK4P11802 303 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 ACP1P24666 158 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 EPHB2P29323 1055 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 ZNF211Q13398 564 aaPredicted RBP25.62■■□□□ 1.69
U2AF1-201ENST00000291552 EFHC2Q5JST6 749 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 ACAD10Q6JQN1 1059 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 SCYL2Q6P3W7 929 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 HMCESQ96FZ2 354 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 LRIG1Q96JA1 1093 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 CNPY3Q9BT09 278 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 TMEM63CQ9P1W3 806 aa25.62■■□□□ 1.69
U2AF1-201ENST00000291552 IGLON5A6NGN9 336 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 JUPP14923 745 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 FERP16591 822 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 HNF1BP35680 557 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 SNRPD1P62314 119 aaKnown RBP25.61■■□□□ 1.69
U2AF1-201ENST00000291552 TARDBPQ13148 414 aaKnown RBP eCLIP25.61■■□□□ 1.69
U2AF1-201ENST00000291552 ILKQ13418 452 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 FZD2Q14332 565 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 COL28A1Q2UY09 1125 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 MYLK3Q32MK0 819 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 ZNF542PQ5EBM4 170 aa25.61■■□□□ 1.69
U2AF1-201ENST00000291552 LRRC73Q5JTD7 316 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms