RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 MTIF3Q9H2K0 278 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CYP3A43Q9HB55 503 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 PNPLA3Q9NST1 481 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 IKZF3Q9UKT9 509 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 LRRC42Q9Y546 428 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 NADKO95544 446 aaPredicted RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 STAG3L1P0CL83 205 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 COX7A2P14406 83 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 BCAP31P51572 246 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 BST2Q10589 180 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 BIKQ13323 160 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 PAN2Q504Q3 1202 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 USP7Q93009 1102 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 MARK4Q96L34 752 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CITED4Q96RK1 184 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 SENP6Q9GZR1 1112 aaPredicted RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNQ5Q9NR82 932 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CHST7Q9NS84 486 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CLN6Q9NWW5 311 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ING3Q9NXR8 418 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 VPS51Q9UID3 782 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 TRDMT1O14717 391 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 COX4I1P13073 169 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF24P17028 368 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ABCG1P45844 678 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 TOB1P50616 345 aaPredicted RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 RRP1BQ14684 758 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 INTS11Q5TA45 600 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 AMIGO2Q86SJ2 522 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 TMEM169Q96HH4 297 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 DNAJC18Q9H819 358 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 SEMA4BQ9NPR2 832 aaPredicted RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 TRMT13Q9NUP7 481 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 PLA2G4CQ9UP65 541 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 KPNA6O60684 536 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 USP12O75317 370 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNH1O95259 989 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 PRG2P13727 222 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ALDH7A1P49419 539 aaKnown RBP10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CCR4P51679 360 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 ACLYP53396 1101 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 BNIP1Q12981 228 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 TFAP2DQ7Z6R9 452 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 PARP8Q8N3A8 854 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 DNAJB14Q8TBM8 379 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 COLEC11Q9BWP8 271 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 CIPCQ9C0C6 399 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 OPTCQ9UBM4 332 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 FADS3Q9Y5Q0 445 aa10.85□□□□□ -0.67
PKNOX1-201ENST00000291547 IQCMA0A1B0GVH7 501 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 SLC25A27O95847 323 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 SNRPB2P08579 225 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 HPCAL1P37235 193 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ANO7Q6IWH7 933 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 IQCF2Q8IXL9 164 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 EDEM1Q92611 657 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TRHDEQ9UKU6 1024 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 COG5Q9UP83 839 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 WBP11Q9Y2W2 641 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 GPC6Q9Y625 555 aaPredicted RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 AP4B1Q9Y6B7 739 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 RAMP2O60895 175 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TYMPP19971 482 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ITGA3P26006 1051 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 CRATP43155 626 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 BNC1Q01954 994 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 KCNT2Q6UVM3 1135 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 AKAP14Q86UN6 197 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 WDR49Q8IV35 697 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 CHST13Q8NET6 341 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 STARD8Q92502 1023 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 REXO5Q96IC2 774 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 DDX3XO00571 662 aaKnown RBP eCLIP10.84□□□□□ -0.678e-6■■■□□ 16
PKNOX1-201ENST00000291547 TRIM38O00635 465 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 PEX11AO75192 247 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ENO2P09104 434 aaPredicted RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TGFBR2P37173 567 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 FOLH1Q04609 750 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ITGA7Q13683 1181 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 GNA13Q14344 377 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 BTN2A1Q7KYR7 527 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 SUN5Q8TC36 379 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 BORCS5Q969J3 196 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 KLQ9UEF7 1012 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TBC1D30Q9Y2I9 924 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 TPP1O14773 563 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 HLA-DQA2P01906 255 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ARP10275 920 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ZNF12P17014 697 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 ILF2Q12905 390 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 NAB1Q13506 487 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 AUHQ13825 339 aaKnown RBP10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 QPCTQ16769 361 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 DSG4Q86SJ6 1040 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 GPSM1Q86YR5 675 aa10.84□□□□□ -0.67
PKNOX1-201ENST00000291547 Q96MT0 163 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms