RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 TIMM44O43615 452 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 CISD3P0C7P0 127 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TYRP14679 529 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ITIH2P19823 946 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TPSB2P20231 275 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 PTPN3P26045 913 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 RBL1P28749 1068 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 VIPR2P41587 438 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 NSUN2Q08J23 767 aaKnown RBP eCLIP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 AP1B1Q10567 949 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TPSAB1Q15661 275 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 BBS9Q3SYG4 887 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TFAP2DQ7Z6R9 452 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 CIR1Q86X95 450 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TMEM121Q9BTD3 319 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 STMN4Q9H169 189 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 ABCB8Q9NUT2 735 aa8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 SAE1Q9UBE0 346 aaPredicted RBP8.57□□□□□ -1.04
PTPDC1-201ENST00000288976 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 C2CD4DB7Z1M9 353 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 AP3B1O00203 1094 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 S100BP04271 92 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 GGCXP38435 758 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 WASHC5Q12768 1159 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PARP6Q2NL67 630 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 GAB4Q2WGN9 574 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 TEX44Q53QW1 395 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PARM1Q6UWI2 310 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 CFAP52Q8N1V2 620 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PHTF2Q8N3S3 785 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 C8orf33Q9H7E9 229 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 SLC2A4RGQ9NR83 387 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 NUMBLQ9Y6R0 609 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 NOTCH2Q04721 2471 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 NEDD8-MDP1E9PL57 170 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 DNAJC6O75061 913 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ESRRBO95718 433 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 CSKP41240 450 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 LMAN2Q12907 356 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 SEMA5AQ13591 1074 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 RUNX3Q13761 415 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 LBRQ14739 615 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 MORF4L2Q15014 288 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 AAK1Q2M2I8 961 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ERCC6LQ2NKX8 1250 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ANKRD20A2Q5SQ80 823 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 LY6G5CQ5SRR4 150 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ANKRD20A1Q5TYW2 823 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ANKRD20A3Q5VUR7 823 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ZC3H18Q86VM9 953 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNV2Q8TDN2 545 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ART4Q93070 314 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PBXIP1Q96AQ6 731 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 TADA1Q96BN2 335 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 FSD1LQ9BXM9 530 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PLA2G2FQ9BZM2 168 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 MUC3BQ9H195 1237 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 UBA6A0AVT1 1052 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 RNF103O00237 685 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 DNALI1O14645 258 aaPredicted RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PPFIA2O75334 1257 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 IVLP07476 585 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 CCNB1P14635 433 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 KCNA5P22460 613 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 GDF10P55107 478 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 CDK16Q00536 496 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ITPRIPL2Q3MIP1 535 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 PITRM1Q5JRX3 1037 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 Q7L0L9 218 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 RD3Q7Z3Z2 195 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 TMEM25Q86YD3 366 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 FAM71DQ8N9W8 422 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 FGF14Q92915 247 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 TEKT5Q96M29 485 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 NUDCD1Q96RS6 583 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 LGMNQ99538 433 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 NSRP1Q9H0G5 558 aaKnown RBP8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 ATP13A1Q9HD20 1204 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 SHOC2Q9UQ13 582 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 HS3ST2Q9Y278 367 aa8.56□□□□□ -1.04
PTPDC1-201ENST00000288976 TTC36A6NLP5 189 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 NVLO15381 856 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 SUN1O94901 812 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 GSRP00390 522 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 PABPC1P11940 636 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 MAPK8P45983 427 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 CCDC85BQ15834 202 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 GRAMD4Q6IC98 578 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 RETSATQ6NUM9 610 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 CELF6Q96J87 481 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 FCRL5Q96RD9 977 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 KXD1Q9BQD3 176 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 UBA2Q9UBT2 640 aaPredicted RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 SLC25A13Q9UJS0 675 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 TPX2Q9ULW0 747 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 DOCK8Q8NF50 2099 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 TRDMT1O14717 391 aaKnown RBP8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 IVDP26440 423 aa8.55□□□□□ -1.04
PTPDC1-201ENST00000288976 PLEKHG6Q3KR16 790 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms