RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 C1QTNF3-AMACRE9PGA6 284 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 CST8O60676 142 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 NDUFS2O75306 463 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 GJB3O75712 270 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 POP4O95707 220 aaKnown RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 RFTN1Q14699 578 aaPredicted RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 TMCO4Q5TGY1 634 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 LRRC49Q8IUZ0 686 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 CCDC50Q8IVM0 306 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 PGBD5Q8N414 524 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 RBM41Q96IZ5 413 aaKnown RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 NSMCE3Q96MG7 304 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 GDAP1L1Q96MZ0 367 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 ZNF599Q96NL3 588 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 TSGA13Q96PP4 275 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 HEMGNQ9BXL5 484 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 C6orf106Q9H6K1 298 aaPredicted RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 NCKAP1Q9Y2A7 1128 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 SPAG17Q6Q759 2223 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 GFRA3O60609 400 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 IGSF6O95976 241 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 PYGMP11217 842 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 DHPSP49366 369 aaPredicted RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 RWDD2BP57060 319 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 FAM182AQ5T1J6 154 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 AGBL4Q5VU57 503 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 PSKH2Q96QS6 385 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 LGMNQ99538 433 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 CINPQ9BW66 212 aaPredicted RBP20.16■□□□□ 0.82
TIMP4-201ENST00000287814 FZD4Q9ULV1 537 aa20.16■□□□□ 0.82
TIMP4-201ENST00000287814 THADAQ6YHU6 1953 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 TTC24A2A3L6 582 aaPredicted RBP20.15■□□□□ 0.82
TIMP4-201ENST00000287814 PECAM1P16284 738 aaPredicted RBP20.15■□□□□ 0.82
TIMP4-201ENST00000287814 ZFXP17010 805 aaPredicted RBP20.15■□□□□ 0.82
TIMP4-201ENST00000287814 ZNF33AQ06730 810 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 B4GALNT4Q76KP1 1039 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 HES6Q96HZ4 224 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 LOXL4Q96JB6 756 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 ARRDC1-AS1Q9H2J1 176 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 SGK2Q9HBY8 427 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 SEPT3Q9UH03 358 aa20.15■□□□□ 0.82
TIMP4-201ENST00000287814 GON4LQ3T8J9 2241 aa20.14■□□□□ 0.82
TIMP4-201ENST00000287814 EPN2O95208 641 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 SEMA4FO95754 770 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 RETP07949 1114 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 MX2P20592 715 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 CCNCP24863 283 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 TAS2R38P59533 333 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 ZNF211Q13398 564 aaPredicted RBP20.14■□□□□ 0.81
TIMP4-201ENST00000287814 TFDP2Q14188 446 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 CCDC6Q16204 474 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 PPP2R5EQ16537 467 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 SPDYCQ5MJ68 293 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 PIP5KL1Q5T9C9 394 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 ALYREFQ86V81 257 aaKnown RBP20.14■□□□□ 0.81
TIMP4-201ENST00000287814 TEX26Q8N6G2 289 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 CCNYQ8ND76 341 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 OR14C36Q8NHC7 312 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 MAML1Q92585 1016 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 HDAC11Q96DB2 347 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 HSPA12BQ96MM6 686 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 OLFM3Q96PB7 478 aa20.14■□□□□ 0.81
TIMP4-201ENST00000287814 EP300Q09472 2414 aaPredicted RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 FAM47DPA6NHR8 397 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 C10orf142B7Z368 130 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 MATN3O15232 486 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 PIGNO95427 931 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 UGT2B4P06133 528 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 ITPKAP23677 461 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 ADPRHP54922 357 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 CREB5Q02930 508 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 NSUN2Q08J23 767 aaKnown RBP eCLIP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 MARC1Q5VT66 337 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 DCAF12L1Q5VU92 463 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 NCEH1Q6PIU2 408 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 CADM4Q8NFZ8 388 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 RUBCNQ92622 972 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 LRIG1Q96JA1 1093 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 KLHL32Q96NJ5 620 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 TMEM74BQ9NUR3 256 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 NCDNQ9UBB6 729 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 RIF1Q5UIP0 2472 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 BCLAF3A2AJT9 711 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 METTL12A8MUP2 240 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 MIF4GDA9UHW6 222 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 CR2P20023 1033 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 MAOBP27338 520 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 CSNK1DP48730 415 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 COPS2P61201 443 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 MAXP61244 160 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 PPIDQ08752 370 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 SFSWAPQ12872 951 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 HNRNPDQ14103 355 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 LYSMD4Q5XG99 296 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 GDPD4Q6W3E5 623 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 BBS12Q6ZW61 710 aa20.13■□□□□ 0.81
TIMP4-201ENST00000287814 ERN2Q76MJ5 926 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 PARS2Q7L3T8 475 aaKnown RBP20.13■□□□□ 0.81
TIMP4-201ENST00000287814 SRLQ86TD4 932 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms