RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 KLK10O43240 276 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 PPIP5K2O43314 1243 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 CEP104O60308 925 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ZNF623O75123 536 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 IFNB1P01574 187 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TFRCP02786 760 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 PCCAP05165 728 aaPredicted RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 JUNP05412 331 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 GPR89BP0CG08 455 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TXNP10599 105 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 XRCC6P12956 609 aaKnown RBP eCLIP4.75□□□□□ -1.65
CD44-202ENST00000278385 EPHX2P34913 555 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ADRA1BP35368 520 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 BSGP35613 385 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 CASP3P42574 277 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 LMAN1P49257 510 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 RPS8P62241 208 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 CDC42EP1Q00587 391 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 PPARAQ07869 468 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SLC13A2Q13183 592 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 BMPR2Q13873 1038 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 IRF3Q14653 427 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 INAQ16352 499 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 MEP1BQ16820 701 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 NRN1LQ496H8 165 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 CCDC152Q4G0S7 254 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 RAB41Q5JT25 222 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 C9orf152Q5JTZ5 239 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TTC22Q5TAA0 569 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ARHGAP11AQ6P4F7 1023 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SUSD1Q6UWL2 747 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 GBP6Q6ZN66 633 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 LINC00696Q6ZRV3 163 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 KANSL1Q7Z3B3 1105 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 POLNQ7Z5Q5 900 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 PPP1R3BQ86XI6 285 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SPATA2LQ8IUW3 424 aaPredicted RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 RHOT1Q8IXI2 618 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ADGRF2Q8IZF7 708 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 DNAJC5GQ8N7S2 189 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 FRMD1Q8N878 549 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 PI4KAP1Q8N8J0 262 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 RTL3Q8N8U3 475 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 OR6C4Q8NGE1 309 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SETD6Q8TBK2 473 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SLC5A11Q8WWX8 675 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 RABGGTAQ92696 567 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 C3orf49Q96BT1 292 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 GCNAQ96QF7 691 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TCF25Q9BQ70 676 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ZNF518BQ9C0D4 1074 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 INTS2Q9H0H0 1204 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 IL21RQ9HBE5 538 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 TCP11L1Q9NUJ3 509 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 CLIP2Q9UDT6 1046 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 FAM153AQ9UHL3 310 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 ZMYND8Q9ULU4 1186 aaPredicted RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 CA14Q9ULX7 337 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 MAP3K2Q9Y2U5 619 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 MRPL11Q9Y3B7 192 aaKnown RBP4.75□□□□□ -1.65
CD44-202ENST00000278385 PAXBP1Q9Y5B6 917 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 POMT1Q9Y6A1 747 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 SCN7AQ01118 1682 aa4.75□□□□□ -1.65
CD44-202ENST00000278385 KDM3BQ7LBC6 1761 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 A0A1W2PRV1 198 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 PMS2P1A4D2B8 440 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 GLOD5A6NK44 160 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 LIPT2A6NK58 231 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 TMEM232C9JQI7 657 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 PYCARD-AS1I3L0S3 204 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 KIF2AO00139 706 aaPredicted RBP4.74□□□□□ -1.65
CD44-202ENST00000278385 TSPAN4O14817 238 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 PCDH17O14917 1159 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 TGFB1I1O43294 461 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 SLC25A17O43808 307 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 TLR2O60603 784 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 MTRF1O75570 445 aaKnown RBP4.74□□□□□ -1.65
CD44-202ENST00000278385 REC8O95072 547 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 C22orf31O95567 290 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 PAHP00439 452 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 FTH1P19P0C7X4 201 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 ALADP13716 330 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 KRT4P19013 534 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 MALP21145 153 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 SAT1P21673 171 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 CPT2P23786 658 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 MCM7P33993 719 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 SOX6P35712 828 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 MAGEA10P43363 369 aaPredicted RBP4.74□□□□□ -1.65
CD44-202ENST00000278385 ZNF81P51508 661 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 NPEPPSP55786 919 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 ACTR1AP61163 376 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 ATP2C1P98194 919 aaPredicted RBP4.74□□□□□ -1.65
CD44-202ENST00000278385 DEUP1Q05D60 604 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 RUNX1T1Q06455 604 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 SLC20A2Q08357 652 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 CETN1Q12798 172 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 CUL2Q13617 745 aa4.74□□□□□ -1.65
CD44-202ENST00000278385 MXD4Q14582 209 aaPredicted RBP4.74□□□□□ -1.65
CD44-202ENST00000278385 GRM7Q14831 915 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms