RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 SNRPAP09012 282 aaKnown RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 CDC25CP30307 473 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ITKQ08881 620 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ZNF177Q13360 481 aaPredicted RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 PKN3Q6P5Z2 889 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 SLC25A41Q8N5S1 370 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 CHMP6Q96FZ7 201 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 PPP1R2P1Q96PQ5 205 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 SEMA3CQ99985 751 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 PRKAG3Q9UGI9 489 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 RWDD3Q9Y3V2 267 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 LOC285095A0A1B0GVY8 99 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 LEFTY2O00292 366 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 MT-ND3P03897 115 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 PCID2Q5JVF3 399 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 RNF43Q68DV7 783 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 FSD1LQ9BXM9 530 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 TREX1Q9NSU2 369 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 TCAF1Q9Y4C2 921 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 MAGEB16A2A368 324 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 SNAP91O60641 907 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 CKMP06732 381 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 CR2P20023 1033 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 CA4P22748 312 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ARCN1P48444 511 aaKnown RBP12.28□□□□□ -0.44
SDE2-201ENST00000272091 OXCT1P55809 520 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 MROH9Q5TGP6 573 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 ADGRD2Q7Z7M1 963 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 TCP10LQ8TDR4 215 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 APOPT1Q96IL0 206 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 SPON2Q9BUD6 331 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 VPS45Q9NRW7 570 aa12.28□□□□□ -0.44
SDE2-201ENST00000272091 TRAV19A0A0A6YYK7 116 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 NEBLO76041 1014 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 LUC7L3O95232 432 aaKnown RBP12.27□□□□□ -0.44
SDE2-201ENST00000272091 C1RP00736 705 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 ETV4P43268 484 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 NTHL1P78549 312 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 NAB1Q13506 487 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 SHHQ15465 462 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 TEAD2Q15562 447 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 SIRPB2Q5JXA9 342 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 PRSS36Q5K4E3 855 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 ELMOD1Q8N336 334 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 CARNMT1Q8N4J0 409 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 HJURPQ8NCD3 748 aaPredicted RBP12.27□□□□□ -0.44
SDE2-201ENST00000272091 SGSM3Q96HU1 749 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 DDX50Q9BQ39 737 aaKnown RBP12.27□□□□□ -0.44
SDE2-201ENST00000272091 FAM107BQ9H098 131 aa12.27□□□□□ -0.44
SDE2-201ENST00000272091 MRM3Q9HC36 420 aaKnown RBP12.27□□□□□ -0.44
SDE2-201ENST00000272091 TRANK1O15050 2925 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 GOLGA8TH3BQL2 631 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 PER2O15055 1255 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 TOP3BO95985 862 aaKnown RBP12.27□□□□□ -0.45
SDE2-201ENST00000272091 ALDOAP04075 364 aaKnown RBP12.27□□□□□ -0.45
SDE2-201ENST00000272091 CCT5P48643 541 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 HSP90AA5PQ58FG0 334 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 C2orf16Q68DN1 1984 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 ESRP1Q6NXG1 681 aaKnown RBP12.27□□□□□ -0.45
SDE2-201ENST00000272091 TIFABQ6ZNK6 161 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 BHMTQ93088 406 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 TRIB3Q96RU7 358 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 POLR1EQ9GZS1 481 aaKnown RBP12.27□□□□□ -0.45
SDE2-201ENST00000272091 NKIRAS1Q9NYS0 192 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 UBA2Q9UBT2 640 aaPredicted RBP12.27□□□□□ -0.45
SDE2-201ENST00000272091 AP3B1O00203 1094 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 NDUFAB1O14561 156 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 KRT37O76014 449 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 RHOP08100 348 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 ADRA1DP25100 572 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 PBX2P40425 430 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 KCNMB4Q86W47 210 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 CPXM2Q8N436 756 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 NSMCE1Q8WV22 266 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 SPOCK2Q92563 424 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 PSKH2Q96QS6 385 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 FEM1AQ9BSK4 669 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 HCFC2Q9Y5Z7 792 aa12.27□□□□□ -0.45
SDE2-201ENST00000272091 REV3LO60673 3130 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 RANBP2P49792 3224 aaKnown RBP12.26□□□□□ -0.45
SDE2-201ENST00000272091 DHRS4L1P0CG22 281 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 TAC1P20366 129 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 CSKP41240 450 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 SERPINB9P50453 376 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 ZNF235Q14590 738 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 CGB2Q6NT52 195 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 LVRNQ6Q4G3 990 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 LINGO4Q6UY18 593 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 TTC16Q8NEE8 873 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 ACVR1CQ8NER5 493 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 MICAL1Q8TDZ2 1067 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 ZNF707Q96C28 371 aaPredicted RBP12.26□□□□□ -0.45
SDE2-201ENST00000272091 MAGEB18Q96M61 343 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 NOD2Q9HC29 1040 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 ZFATQ9P243 1243 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 ARHGAP26Q9UNA1 814 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 CBX4O00257 560 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 RB1P06400 928 aa12.26□□□□□ -0.45
SDE2-201ENST00000272091 GMPRP36959 345 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms