RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ZNF18P17022 549 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 HNRNPA2B1P22626 353 aaKnown RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 SCNN1AP37088 669 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 SERPINH1P50454 418 aaKnown RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 NOMO3P69849 1222 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 PTK2Q05397 1052 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 DEUP1Q05D60 604 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 DRAP1Q14919 205 aaPredicted RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 TBC1D25Q3MII6 688 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 DPCR1Q3MIW9 517 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 SLC25A52Q3SY17 297 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM102AQ5T9C2 384 aaPredicted RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM72AQ5TYM5 149 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 KLHDC7AQ5VTJ3 777 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 TAF3Q5VWG9 929 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM72DQ6L9T8 149 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 NEK5Q6P3R8 708 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 TMC6Q7Z403 805 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 NLRP14Q86W24 1093 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM72BQ86X60 149 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM131BQ86XD5 332 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 CREBRFQ8IUR6 639 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 SPACA3Q8IXA5 215 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 EMC1Q8N766 993 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 SLC20A1Q8WUM9 679 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 HIC2Q96JB3 615 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 FAM81BQ96LP2 452 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 APOLD1Q96LR9 279 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 C1orf74Q96LT6 269 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 UBL7Q96S82 380 aaPredicted RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 C2orf49Q9BVC5 232 aaPredicted RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 CALN1Q9BXU9 219 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 TCEAL2Q9H3H9 227 aaPredicted RBP9.13□□□□□ -0.95
TPM3-201ENST00000271850 IL36AQ9UHA7 158 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 AK5Q9Y6K8 562 aa9.13□□□□□ -0.95
TPM3-201ENST00000271850 SPENQ96T58 3664 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 RP1P56715 2156 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ILVBLA1L0T0 632 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 GOLGA8SH3BPF8 625 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 K7ESM1 405 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 EPHB6O15197 1021 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ATXN7O15265 892 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 LZTS3O60299 673 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 OPA1O60313 960 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 SRGAP2O75044 1071 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 PAK4O96013 591 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 PRNPP04156 253 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 MPOP05164 745 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 MMEP08473 750 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ADRB3P13945 408 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 CHRNB2P17787 502 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ITIH2P19823 946 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ITGB7P26010 798 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 OR1E1P30953 314 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KRT9P35527 623 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KLK7P49862 253 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 CCNHP51946 323 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 PDX1P52945 283 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KRT83P78385 493 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 CCDC173Q0VFZ6 552 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 PTP4A2Q12974 167 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 EIF2B5Q13144 721 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 MAN2A1Q16706 1144 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KIF26BQ2KJY2 2108 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 C15orf59Q2T9L4 293 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 VWA3BQ502W6 1294 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KYAT3Q6YP21 454 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 Q6ZSR6 202 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ZDHHC17Q8IUH5 632 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 FAM181AQ8N9Y4 354 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 NETO2Q8NC67 525 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 ZNF548Q8NEK5 533 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 OR6K2Q8NGY2 324 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 JOSD2Q8TAC2 188 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 EPS8L1Q8TE68 723 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 CPA5Q8WXQ8 436 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 FGF11Q92914 225 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 FUBP1Q96AE4 644 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 C18orf8Q96DM3 657 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 PRR11Q96HE9 360 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 FCRL3Q96P31 734 aaPredicted RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 HAPLN3Q96S86 360 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 TM6SF2Q9BZW4 377 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 KLC2Q9H0B6 622 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 GANQ9H2C0 597 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 NDST4Q9H3R1 872 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 NOL6Q9H6R4 1146 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 ASCL3Q9NQ33 180 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 RRN3Q9NYV6 651 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 NLGN3Q9NZ94 848 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 NOCTQ9UK39 431 aaKnown RBP9.12□□□□□ -0.95
TPM3-201ENST00000271850 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
TPM3-201ENST00000271850 SPTY2D1-AS1A0A0U1RR47 76 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 LOC100996750A0A140TA64 210 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 IGLON5A6NGN9 336 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 F8VZ95 297 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 SCAMP1O15126 338 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 MAGEC1O60732 1142 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 PCDH8O95206 1070 aa9.11□□□□□ -0.95
TPM3-201ENST00000271850 FGFR1OPO95684 399 aaKnown RBP9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms