RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 SLC4A11Q8NBS3 891 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 TRPM4Q8TD43 1214 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 UTP15Q8TED0 518 aaKnown RBP11.68□□□□□ -0.54
VPS33A-201ENST00000267199 PANX3Q96QZ0 392 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 COQ7Q99807 217 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 GPR63Q9BZJ6 419 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 WWOXQ9NZC7 414 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
VPS33A-201ENST00000267199 HNRNPCL2B2RXH8 293 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 PDHXO00330 501 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC166P0CW27 439 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 RAD51Q06609 339 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SPESP1Q6UW49 350 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 MOB2Q70IA6 237 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 RRM2BQ7LG56 351 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 OFCC1Q8IZS5 231 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 C8orf59Q8N0T1 100 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF781Q8N8C0 355 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 POC5Q8NA72 575 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 LPGAT1Q92604 370 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 BHMTQ93088 406 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 OMA1Q96E52 524 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ACOX2Q99424 681 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SPON1Q9HCB6 807 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SEMA4BQ9NPR2 832 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CPA4Q9UI42 421 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 LAMA4Q16363 1823 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 BDNFP23560 247 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CSTF3Q12996 717 aaKnown RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 OVOS1Q6IE37 1185 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 RNF19BQ6ZMZ0 732 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 B3GALNT2Q8NCR0 500 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 HSPBAP1Q96EW2 488 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 VAT1Q99536 393 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 IL22Q9GZX6 179 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 RGS18Q9NS28 235 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 TMEM216Q9P0N5 145 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF214Q9UL59 606 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 EIF3LQ9Y262 564 aaKnown RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 FADS3Q9Y5Q0 445 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 KCNU1A8MYU2 1149 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CLDN5O00501 218 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 LSM1O15116 133 aaKnown RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 HIST1H2AGP0C0S8 130 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SLC2A4P14672 509 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 HIST1H2ADP20671 130 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 VEPH1Q14D04 833 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 PFKFB4Q16877 469 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 BROXQ5VW32 411 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 PMF1Q6P1K2 205 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 LBX2Q6XYB7 198 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 LRTOMTQ8WZ04 291 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 HIST1H2AHQ96KK5 128 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CSPG4P5Q96PW8 444 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 BTBD9Q96Q07 612 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 HIST1H2AJQ99878 128 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 H2AFJQ9BTM1 129 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CACNA2D2Q9NY47 1150 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SLC17A6Q9P2U8 582 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 BTRCQ9Y297 605 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 TCEA3O75764 348 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SEC24AO95486 1093 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CSH1P0DML2 217 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CSH2P0DML3 217 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 IRF1P10914 325 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CRABP2P29373 138 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 MATKP42679 507 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 EMC10Q5UCC4 262 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 NEPROQ6NW34 567 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ATG14Q6ZNE5 492 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC80Q76M96 950 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 FBXO39Q8N4B4 442 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF276Q8N554 614 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SLC35B2Q8TB61 432 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 FBXO32Q969P5 355 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 SMARCD1Q96GM5 515 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 GPR88Q9GZN0 384 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 EPS8L2Q9H6S3 715 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ZFYVE28Q9HCC9 887 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 CICQ96RK0 1608 aaPredicted RBP11.67□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF536O15090 1300 aa11.67□□□□□ -0.54
VPS33A-201ENST00000267199 GPR182O15218 404 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ATG7O95352 703 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 MED26O95402 600 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CRTAMO95727 393 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 HUNKP57058 714 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SH3PXD2AQ5TCZ1 1133 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 LIPMQ5VYY2 423 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 SLC44A2Q8IWA5 706 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 C18orf25Q96B23 403 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CINPQ9BW66 212 aaPredicted RBP11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ZNF358Q9NW07 568 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 USE1Q9NZ43 259 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 MORF4L1Q9UBU8 362 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 CCDC189A1A4V9 331 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 TTLL13PA6NNM8 815 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 H3BSA7 217 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 PLIN3O60664 434 aa11.66□□□□□ -0.54
VPS33A-201ENST00000267199 ENDOD1O94919 500 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms