RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 RTP3Q9BQQ7 232 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 TKTL2Q9H0I9 626 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 WDCPQ9H6R7 721 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 VTI1BQ9UEU0 232 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 FRMPD3Q5JV73 1810 aa12.62□□□□□ -0.39
BEST3-201ENST00000266661 GOLGA8QA0A0J9YX86 632 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 GOLGA8OA6NCC3 632 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 GOLGA8NF8WBI6 632 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 SLCO1B7G3V0H7 640 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 GOLGA8TH3BQL2 631 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PHGDHO43175 533 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 DDHD2O94830 711 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 JUNP05412 331 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 ZNF865P0CJ78 1059 aaPredicted RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 CCNCP24863 283 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 EPHA3P29320 983 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 HOXC13P31276 330 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 DPP6P42658 865 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 NAGLUP54802 743 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 SLC12A1Q13621 1099 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 RFTN1Q14699 578 aaPredicted RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 LIN52Q52LA3 116 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PCID2Q5JVF3 399 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 OLFML2BQ68BL8 750 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 SEL1L3Q68CR1 1132 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 FBXL19Q6PCT2 694 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 TMC7Q7Z402 723 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 LINC00523Q86TU6 105 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 TMEM126BQ8IUX1 230 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 CEP97Q8IW35 865 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PQLC1Q8N2U9 271 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 KYQ8NBH2 561 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 C3orf58Q8NDZ4 430 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PDCD6IPQ8WUM4 868 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 SREK1Q8WXA9 508 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 TASP1Q9H6P5 420 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 ACSS2Q9NR19 701 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 UBP1Q9NZI7 540 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 C6orf203Q9P0P8 240 aaPredicted RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 DENRO43583 198 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 SERPINB5P36952 375 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PPARGP37231 505 aaPredicted RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 THOP1P52888 689 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 MED21Q13503 144 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 CEACAM7Q14002 265 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 USP10Q14694 798 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 LRRC36Q1X8D7 754 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 MAP3K21Q5TCX8 1036 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 MANEALQ5VSG8 457 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 LRRC8EQ6NSJ5 796 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 C16orf89Q6UX73 402 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 ARHGAP36Q6ZRI8 547 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 BEND5Q7L4P6 421 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 ARHGAP18Q8N392 663 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 SPATA22Q8NHS9 363 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PXYLP1Q8TE99 480 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 EDEM1Q92611 657 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 CELF6Q96J87 481 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 GBP5Q96PP8 586 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 PKMYT1Q99640 499 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 SPATA16Q9BXB7 569 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 MRM3Q9HC36 420 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 ARHGEF38Q9NXL2 777 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 TLK1Q9UKI8 766 aa12.61□□□□□ -0.39
BEST3-201ENST00000266661 RUVBL2Q9Y230 463 aaKnown RBP12.61□□□□□ -0.39
BEST3-201ENST00000266661 TCAF2A6NFQ2 919 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 ACOT8O14734 319 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 AIM2O14862 343 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 NPHS1O60500 1241 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 PABPC4LP0CB38 370 aaKnown RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 XRCC1P18887 633 aaPredicted RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 ALDH1A3P47895 512 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 NUDT2P50583 147 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 PRMT2P55345 433 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 MS4A2Q01362 244 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 CYLC2Q14093 348 aaPredicted RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 PRPSAP1Q14558 356 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 TRIP10Q15642 601 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 CNPY1Q3B7I2 92 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 FAM171BQ6P995 826 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 SETD3Q86TU7 594 aaPredicted RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 SLC41A1Q8IVJ1 513 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 PGAM4Q8N0Y7 254 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 MARVELD2Q8N4S9 558 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 HIPK4Q8NE63 616 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 AGR3Q8TD06 166 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 DQX1Q8TE96 717 aaKnown RBP12.6□□□□□ -0.39
BEST3-201ENST00000266661 SH3GL3Q99963 347 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 TBL1YQ9BQ87 522 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 NUF2Q9BZD4 464 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 GLOD4Q9HC38 313 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 ZBTB26Q9HCK0 441 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 TREX1Q9NSU2 369 aa12.6□□□□□ -0.39
BEST3-201ENST00000266661 RIMS3Q9UJD0 308 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms