RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 YWHAGP61981 247 aaKnown RBP eCLIP12.83□□□□□ -0.35
PRPF6-201ENST00000266079 SLC25A3Q00325 362 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 MTA1Q13330 715 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 PIGHQ14442 188 aaPredicted RBP12.83□□□□□ -0.35
PRPF6-201ENST00000266079 ATG16L1Q676U5 607 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 SCD5Q86SK9 330 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 MRPL43Q8N983 215 aaKnown RBP12.83□□□□□ -0.35
PRPF6-201ENST00000266079 CPT1BQ92523 772 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 KLHL5Q96PQ7 755 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 DDIT4Q9NX09 232 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 MSRAQ9UJ68 235 aa12.83□□□□□ -0.35
PRPF6-201ENST00000266079 GBF1Q92538 1859 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 COPEO14579 308 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 LILRB3O75022 631 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 STK10O94804 968 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ABLIM3O94929 683 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 KRT1P04264 644 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 CD48P09326 243 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 MATKP42679 507 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 RPL34P49207 117 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 GALK1P51570 392 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 HDAC4P56524 1084 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 TMPRSS15P98073 1019 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 TMED1Q13445 227 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 RAB33AQ14088 237 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 PPP6R3Q5H9R7 873 aaPredicted RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ZDHHC17Q8IUH5 632 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 METTL25Q8N6Q8 603 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 NAT8LQ8N9F0 302 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 RNF34Q969K3 372 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 E2F7Q96AV8 911 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 RILPQ96NA2 401 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 IQCGQ9H095 443 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ASNSD1Q9NWL6 643 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 USP18Q9UMW8 372 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ZNF232Q9UNY5 417 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 PCDHA11Q9Y5I1 949 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 SLC38A8A6NNN8 435 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ADH1AP07327 375 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 EPCAMP16422 314 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 GJA1P17302 382 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 AOC1P19801 751 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 RPL10AP62906 217 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 DYNLT1P63172 113 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 UBAP2LQ14157 1087 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 BBS9Q3SYG4 887 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 SPOCD1Q6ZMY3 1216 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ADGRD2Q7Z7M1 963 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ZBTB8BQ8NAP8 495 aaPredicted RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ZFP28Q8NHY6 868 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 SLC44A1Q8WWI5 657 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 ZFRQ96KR1 1074 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 C8orf48Q96LL4 319 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 SRPK1Q96SB4 655 aaKnown RBP12.83□□□□□ -0.36
PRPF6-201ENST00000266079 APOL5Q9BWW9 433 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 PLK2Q9NYY3 685 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 SORCS3Q9UPU3 1222 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 DMTF1Q9Y222 760 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 LZTS1Q9Y250 596 aa12.83□□□□□ -0.36
PRPF6-201ENST00000266079 PTPRDP23468 1912 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CCL16O15467 120 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 DENRO43583 198 aaKnown RBP12.82□□□□□ -0.36
PRPF6-201ENST00000266079 PRPSAP2O60256 369 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 FBXO21O94952 628 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MOCS2O96007 188 aaPredicted RBP12.82□□□□□ -0.36
PRPF6-201ENST00000266079 C8AP07357 584 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 FDFT1P37268 417 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MAGEA11P43364 429 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 TUFMP49411 452 aaKnown RBP12.82□□□□□ -0.36
PRPF6-201ENST00000266079 SERPINB8P50452 374 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CBX3Q13185 183 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 PGM2L1Q6PCE3 622 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CDHR3Q6ZTQ4 885 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 TDHQ8IZJ6 230 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CCDC185Q8N715 623 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 KREMEN2Q8NCW0 462 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MECRQ9BV79 373 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CALN1Q9BXU9 219 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 IGFLR1Q9H665 355 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CCSER2Q9H7U1 834 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 PIGVQ9NUD9 493 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 INSL5Q9Y5Q6 135 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 USP3Q9Y6I4 520 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 COL6A3P12111 3177 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 INHBAP08476 426 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 KITP10721 976 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 EPHB1P54762 984 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 EFEMP1Q12805 493 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 TLR1Q15399 786 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CA9Q16790 459 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MYLK3Q32MK0 819 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 GRAMD1BQ3KR37 738 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 CRLF3Q8IUI8 442 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 PYROXD2Q8N2H3 581 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 NETO2Q8NC67 525 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
PRPF6-201ENST00000266079 MRPS26Q9BYN8 205 aaKnown RBP12.82□□□□□ -0.36
PRPF6-201ENST00000266079 ZNF395Q9H8N7 513 aaPredicted RBP12.82□□□□□ -0.36
PRPF6-201ENST00000266079 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.82□□□□□ -0.361e-6■■■■□ 21.4
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms