RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 NSMCE2Q96MF7 247 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CISHQ9NSE2 258 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 IFT52Q9Y366 437 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 RALGAPA1Q6GYQ0 2036 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PIPSLA2A3N6 862 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 HACD1B0YJ81 288 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 LOC110117498-PIK3R3F6TDL0 507 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 DPYSL4O14531 572 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PPP2R1BP30154 601 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 LRRC38Q5VT99 294 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 GMCL1P1Q8NEA9 526 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SLC25A23Q9BV35 468 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PDGFCQ9NRA1 345 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CRLS1Q9UJA2 301 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 RGSL1A5PLK6 1076 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 OGTO15294 1046 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ITGAVP06756 1048 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZNF3P17036 446 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NPR2P20594 1047 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 GNA12Q03113 381 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TBCELQ5QJ74 424 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 LDLRAP1Q5SW96 308 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ADHFE1Q8IWW8 467 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 JPH3Q8WXH2 748 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 CHST12Q9NRB3 414 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 APOC4-APOC2K7ER74 178 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TFECO14948 347 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 UBDO15205 165 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MOCS2O96007 188 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 APOC2P02655 101 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ITGB3P05106 788 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MSH3P20585 1137 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PIK3R1P27986 724 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NUP62P37198 522 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 NEK3P51956 506 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 HSF2Q03933 536 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 COX10Q12887 443 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MAD2L1Q13257 205 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 BAATQ14032 418 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 HIST2H2ACQ16777 129 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 HIST2H2AA3Q6FI13 130 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SEPT12Q8IYM1 358 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 KRT78Q8N1N4 520 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 FERD3LQ96RJ6 166 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TSEN34Q9BSV6 310 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 HDHD2Q9H0R4 259 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZNRF3Q9ULT6 936 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PRPF19Q9UMS4 504 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 FADS2P1A8MWK0 482 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ACSL4O60488 711 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PRKAR1AP10644 381 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 HNRNPH3P31942 346 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 SLC12A3P55017 1021 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NFYCQ13952 458 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 TAF5Q15542 800 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NTRK3Q16288 839 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SSX2Q16385 188 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NFIL3Q16649 462 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 DCDC5Q6ZRR9 648 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZNF420Q8TAQ5 688 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 S100PBPQ96BU1 408 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MSANTD3Q96H12 275 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 SAV1Q9H4B6 383 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 MAGEE1Q9HCI5 957 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 PIM2Q9P1W9 311 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CEP170BQ9Y4F5 1589 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 CPNE3O75131 537 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 FGFR3P22607 806 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 RPL10AP62906 217 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZRANB3Q5FWF4 1079 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 N4BP2L1Q5TBK1 243 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 MFSD14CQ5VZR4 134 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CDC42EP5Q6NZY7 148 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CBWD2Q8IUF1 395 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ARMC8Q8IUR7 673 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ABRAQ8N0Z2 381 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 OR8K3Q8NH51 312 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ETNPPLQ8TBG4 499 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 HM13Q8TCT9 377 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NACC2Q96BF6 587 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CADM1Q9BY67 442 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 CYTH4Q9UIA0 394 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 UBQLN1Q9UMX0 589 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 RUVBL2Q9Y230 463 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 PRG2P13727 222 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 BDNFP23560 247 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CA9Q16790 459 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 KCNMB4Q86W47 210 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 MCOLN2Q8IZK6 566 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CYP4Z2PQ8N1L4 340 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ZNF486Q96H40 463 aaPredicted RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 TCF12Q99081 682 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 GTPBP2Q9BX10 602 aaKnown RBP5.76□□□□□ -1.49
VCAN-201ENST00000265077 IL22Q9GZX6 179 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 ATP13A3Q9H7F0 1226 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 CNTNAP4Q9C0A0 1308 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 EFCAB10A6NFE3 127 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 GH1P01241 217 aa5.76□□□□□ -1.49
VCAN-201ENST00000265077 NR3C2P08235 984 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms