RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 hCG_1818297A0A087WSY0 165 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CCDC163A0A0D9SF12 145 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 TARSL2A2RTX5 802 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 GOLGA8CPA6NN73 597 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 MCF2LO15068 1137 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 TDRD6O60522 2096 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 NDUFS2O75306 463 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZRANB2O95218 330 aaKnown RBP eCLIP7.36□□□□□ -1.233e-7■■■□□ 17.7
DEPDC1B-201ENST00000265036 ITIH2P19823 946 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CD6P30203 668 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 GARSP41250 739 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 SCNN1BP51168 640 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PPP2CBP62714 309 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PPP2CAP67775 309 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CYTH1Q15438 398 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 LRRK1Q38SD2 2015 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CARD16Q5EG05 197 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CCDC181Q5TID7 509 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 LRRC38Q5VT99 294 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PMS2CLQ68D20 193 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 NCEH1Q6PIU2 408 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ADAT2Q7Z6V5 191 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZC3H18Q86VM9 953 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 KATNAL2Q8IYT4 538 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 RGL4Q8IZJ4 473 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PCDH20Q8N6Y1 951 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 KDM1BQ8NB78 822 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PDCD6IPQ8WUM4 868 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PIGKQ92643 395 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 KLK6Q92876 244 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 CCDC114Q96M63 670 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 NSMCE3Q96MG7 304 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 GDAP1L1Q96MZ0 367 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 MAK16Q9BXY0 300 aaKnown RBP7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 ARRDC1-AS1Q9H2J1 176 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 NT5MQ9NPB1 228 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 LCMT1Q9UIC8 334 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 GGT7Q9UJ14 662 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 AMFRQ9UKV5 643 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 PYCARDQ9ULZ3 195 aa7.36□□□□□ -1.23
DEPDC1B-201ENST00000265036 BPTFQ12830 3046 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZSCAN5CA6NGD5 496 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 BTNL10A8MVZ5 291 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 MEI4A8MW99 385 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 FSBPO95073 299 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 SEMA4FO95754 770 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 IGSF6O95976 241 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PYGMP11217 842 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PLA2G5P39877 138 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 CLCN6P51797 869 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZNF135P52742 658 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ADPRHP54922 357 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 GEMIN4P57678 1058 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZNF33AQ06730 810 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 AP1B1Q10567 949 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 LBRQ14739 615 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 TFDP3Q5H9I0 405 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 AGBL4Q5VU57 503 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 KDM7AQ6ZMT4 941 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PARS2Q7L3T8 475 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 CAMK1DQ8IU85 385 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 C17orf53Q8N3J3 647 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PGBD5Q8N414 524 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 LZTR1Q8N653 840 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 KLHL32Q96NJ5 620 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 HEPHQ9BQS7 1158 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 BTBD1Q9H0C5 482 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ITM2CQ9NQX7 267 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 TMEM74BQ9NUR3 256 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 WSB2Q9NYS7 404 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PPM1HQ9ULR3 514 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 FARP1Q9Y4F1 1045 aaPredicted RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 C1QTNF3-AMACRE9PGA6 284 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ENC1O14682 589 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZNF217O75362 1048 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PEX11BO96011 259 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ADH1BP00325 375 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 SNRPD1P62314 119 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 IL10RBQ08334 325 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ITKQ08881 620 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 GALNT2Q10471 571 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZBTB17Q13105 803 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 PAFAH1B3Q15102 231 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 E2F5Q15329 346 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 SF3A2Q15428 464 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 TMCO4Q5TGY1 634 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 SLC9A4Q6AI14 798 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 LPCAT2Q7L5N7 544 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 DSG4Q86SJ6 1040 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 TXLNBQ8N3L3 684 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 ZCCHC9Q8N567 271 aaKnown RBP7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 VOPP1Q96AW1 172 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 TSGA10Q9BZW7 698 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 CEP44Q9C0F1 390 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 IRF2BPLQ9H1B7 796 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 FZD3Q9NPG1 666 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 DYRK4Q9NR20 520 aa7.35□□□□□ -1.23
DEPDC1B-201ENST00000265036 DONSONQ9NYP3 566 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms