RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 SNX9Q9Y5X1 595 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 M0R2N6 131 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 TRIP4Q15650 581 aaPredicted RBP11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 BRINP3Q76B58 766 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 RAB43Q86YS6 212 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 TMEM143Q96AN5 459 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 PPM1HQ9ULR3 514 aa11.81□□□□□ -0.52
DNMT3A-201ENST00000264709 ATG7O95352 703 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 EPHA3P29320 983 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 STAT5AP42229 794 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ANXA11P50995 505 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ZC3H12BQ5HYM0 836 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 BTBD8Q5XKL5 378 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 CBR4Q8N4T8 237 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TSPAN18Q96SJ8 248 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 REEP1Q9H902 201 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 LATS2Q9NRM7 1088 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 KLRC2P26717 231 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 POU5F1Q01860 360 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 SLC4A11Q8NBS3 891 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TMEM161BQ8NDZ6 487 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 FAM120BQ96EK7 910 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 DGCR6LQ9BY27 220 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ZNF408Q9H9D4 720 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 UBP1Q9NZI7 540 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 HS6ST1O60243 411 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 GUCY1B2O75343 617 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 FBXO39Q8N4B4 442 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TMX2Q9Y320 296 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ARAP2Q8WZ64 1704 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 SCNN1BP51168 640 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 RBM48Q5RL73 367 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 NOTUMQ6P988 496 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 MRPL48Q96GC5 212 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TDRD1Q9BXT4 1180 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 GPRC5DQ9NZD1 345 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 EHD3Q9NZN3 535 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 VAV3Q9UKW4 847 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 PABPC1P11940 636 aaKnown RBP11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 LCP1P13796 627 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ITIH1P19827 911 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ETFBP38117 255 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 GPSM2P81274 684 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 LPCAT4Q643R3 524 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 LRP10Q7Z4F1 713 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TMEM134Q9H6X4 195 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 SIX2Q9NPC8 291 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TAS2R13Q9NYV9 303 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 B3GNT3Q9Y2A9 372 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 PCNAP12004 261 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 C6orf52Q5T4I8 152 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 ZNF605Q86T29 641 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 POC5Q8NA72 575 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 AFG1LQ8WV93 481 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 FAM20BO75063 409 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 TNFAIP8L3Q5GJ75 292 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 PCID2Q5JVF3 399 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 MFSD4BQ5TF39 518 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 UNC5AQ6ZN44 842 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 STK40Q8N2I9 435 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 SEPHS2Q99611 448 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 PLA2G4CQ9UP65 541 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 PCDHA2Q9Y5H9 948 aa11.8□□□□□ -0.52
DNMT3A-201ENST00000264709 WNT7AO00755 349 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 TPD52L2O43399 206 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 RNASEH1O60930 286 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 GSSP48637 474 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 IL18R1Q13478 541 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 HIPK1Q86Z02 1210 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 MYO1HQ8N1T3 1032 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 SLC7A14Q8TBB6 771 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 GTF3C2Q8WUA4 911 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 DDX17Q92841 729 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 TELO2Q9Y4R8 837 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PEX5LQ8IYB4 626 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 STAG3L4Q8TBR4 150 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 OTULINQ96BN8 352 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PGK2P07205 417 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 NOMO1Q15155 1222 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 TXNDC11Q6PKC3 985 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 UNC93AQ86WB7 457 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PANX3Q96QZ0 392 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 POP1Q99575 1024 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PRKAR1AP10644 381 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 ALOX15P16050 662 aaPredicted RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 ATP6V0D1P61421 351 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 ANKS6Q68DC2 871 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 FASTKD5Q7L8L6 764 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 SPATA33Q96N06 139 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 UBQLN1Q9UMX0 589 aaKnown RBP11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 NR2E1Q9Y466 385 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 SCN4AP35499 1836 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PKD1L3Q7Z443 1732 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 IRGMA1A4Y4 181 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 PLA2G6O60733 806 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 GLP2RO95838 553 aa11.79□□□□□ -0.52
DNMT3A-201ENST00000264709 YWHAZP63104 245 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms