RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 ACE2Q9BYF1 805 aaPredicted RBP16.49■□□□□ 0.23
CTCF-201ENST00000264010 CASS4Q9NQ75 786 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 PRKAA1Q13131 559 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 BLMHQ13867 455 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 NEPROQ6NW34 567 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 SLC24A5Q71RS6 500 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 SETD3Q86TU7 594 aaPredicted RBP16.49■□□□□ 0.23
CTCF-201ENST00000264010 TTC7BQ86TV6 843 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 EXT2Q93063 718 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 PNPOQ9NVS9 261 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 MPP6Q9NZW5 540 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 FAM95CA0A1B0GW59 222 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 TMEM114B3SHH9 223 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 E9PBE3 544 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 H7C4K7 107 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 MATN3O15232 486 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 KLHL41O60662 606 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 RAMP2O60895 175 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 DDR2Q16832 855 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 SPATA22Q8NHS9 363 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.49■□□□□ 0.23
CTCF-201ENST00000264010 LRCH1Q9Y2L9 728 aa16.49■□□□□ 0.23
CTCF-201ENST00000264010 ALDH1A2O94788 518 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 TUFMP49411 452 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 CNGA3Q16281 694 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 PGAP3Q96FM1 320 aaPredicted RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 ZNF512Q96ME7 567 aaPredicted RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 AGAP2Q99490 1192 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 PAAF1Q9BRP4 392 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 CADM1Q9BY67 442 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 ZYG11BQ9C0D3 744 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 TCF7L2Q9NQB0 619 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 MARCH2Q9P0N8 246 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 TYW5A2RUC4 315 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 ACADSP16219 412 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 PSMD7P51665 324 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 MRPS15P82914 257 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 ELAVL2Q12926 359 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 OLIG2Q13516 323 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 IL31Q6EBC2 164 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 POU5F2Q8N7G0 328 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 AZIN2Q96A70 460 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 DENND2DQ9H6A0 471 aaPredicted RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 WDR6Q9NNW5 1121 aaKnown RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 PSAT1Q9Y617 370 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 WDR81Q562E7 1941 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 ELNP15502 786 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 SLC41A1Q8IVJ1 513 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 TP53INP2Q8IXH6 220 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 RDH11Q8TC12 318 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 ZNF395Q9H8N7 513 aaPredicted RBP16.48■□□□□ 0.23
CTCF-201ENST00000264010 ZNF229Q9UJW7 825 aa16.48■□□□□ 0.23
CTCF-201ENST00000264010 PRR5-ARHGAP8B1AHC4 643 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 E9PAM4 449 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 IL1BP01584 269 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 THRAP10827 490 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 NMBRP28336 390 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 MAGEA3P43357 314 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 ARHGAP8P85298 464 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 OCRLQ01968 901 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 PRKCZQ05513 592 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 ZNF33AQ06730 810 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 UBAP2LQ14157 1087 aaKnown RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 ZNF534Q76KX8 674 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 MRPL10Q7Z7H8 261 aaKnown RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 NT5C3BQ969T7 300 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 CCDC126Q96EE4 140 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 TRMT13Q9NUP7 481 aaKnown RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 TBC1D23Q9NUY8 699 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 NCKIPSDQ9NZQ3 722 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 APPL1Q9UKG1 709 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 F5H5T6 163 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 AIM2O14862 343 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 SERPINH1P50454 418 aaKnown RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 KPNA1P52294 538 aaPredicted RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 WNT3AP56704 352 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 CDK18Q07002 472 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 NIPAL4Q0D2K0 466 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 C6orf183Q5T699 404 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 ZMIZ2Q8NF64 920 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 RMDN1Q96DB5 314 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 TRPC5OSA6NMA1 111 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 F8W8V4 182 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 PROCP04070 461 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 SLC34A1Q06495 639 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 BFSP2Q13515 415 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 POLD3Q15054 466 aaPredicted RBP16.47■□□□□ 0.23
CTCF-201ENST00000264010 SKA1Q96BD8 255 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 CNBD2Q96M20 576 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 CATSPER2Q96P56 530 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 FCRL5Q96RD9 977 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 SLC39A8Q9C0K1 460 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 TAS2R1Q9NYW7 299 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 USP3Q9Y6I4 520 aa16.47■□□□□ 0.23
CTCF-201ENST00000264010 EOMESO95936 686 aa16.46■□□□□ 0.23
CTCF-201ENST00000264010 MT-CYBP00156 380 aaPredicted RBP16.46■□□□□ 0.23
CTCF-201ENST00000264010 HARS2P49590 506 aaKnown RBP16.46■□□□□ 0.23
CTCF-201ENST00000264010 NAGLUP54802 743 aa16.46■□□□□ 0.23
CTCF-201ENST00000264010 CTBP1Q13363 440 aa16.46■□□□□ 0.23
CTCF-201ENST00000264010 LPIN1Q14693 890 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms