RNA–Protein interactions for RNA: ENST00000262215.7

ARFGEF1-201, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARFGEF1, Length 7,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-201ENST00000262215 NKD1Q969G9 470 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TOP1MTQ969P6 601 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 SEMA6BQ9H3T3 888 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 XPNPEP3Q9NQH7 507 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ACSS2Q9NR19 701 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 INTS7Q9NVH2 962 aaKnown RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 NINJ2Q9NZG7 142 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ENOPH1Q9UHY7 261 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 METP08581 1390 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TLX1P31314 330 aaPredicted RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TGFBR2P37173 567 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 MAN2A2P49641 1150 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 IL18Q14116 193 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 RAET1GQ6H3X3 334 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 RBM44Q6ZP01 1051 aaKnown RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF483Q8TF39 744 aaPredicted RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ERGIC2Q96RQ1 377 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 DGKBQ9Y6T7 804 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 CPSF4LA6NMK7 179 aaKnown RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 NDUFS2O75306 463 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 PSMG1O95456 288 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 POLR2EP19388 210 aaKnown RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TIMM50Q3ZCQ8 353 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ARMC12Q5T9G4 340 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 CHST4Q8NCG5 386 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 FCRL4Q96PJ5 515 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 FNDC11Q9BVV2 318 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 FAM126AQ9BYI3 521 aaPredicted RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TIMM8BQ9Y5J9 83 aaPredicted RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 CASKO14936 926 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 IFNA6P05013 189 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 RBL1P28749 1068 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 CDKL1Q00532 357 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 ATG9AQ7Z3C6 839 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 DEFB106AQ8N104 65 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 FBXW8Q8N3Y1 598 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 SYN2Q92777 582 aaPredicted RBP12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 PCDHA3Q9Y5H8 950 aa12.57□□□□□ -0.4
ARFGEF1-201ENST00000262215 TSPAN4O14817 238 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FADS2O95864 444 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FXR2P51116 673 aaKnown RBP eCLIP12.56□□□□□ -0.44e-6■□□□□ 11.2
ARFGEF1-201ENST00000262215 CHN2P52757 468 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 SLC20A2Q08357 652 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 TCAIMQ8N3R3 496 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 LNX2Q8N448 690 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CHST13Q8NET6 341 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CIDEBQ9UHD4 219 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PGRMC2O15173 223 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 RENBPP51606 427 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ALDH3A2P51648 485 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CASP9P55211 416 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 EIF2S3LQ2VIR3 472 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PLA2G4EQ3MJ16 856 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 SPANXN3Q5MJ09 141 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ENGASEQ8NFI3 743 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF563Q8TA94 476 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CNOT6Q9ULM6 557 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PCDHB5Q9Y5E4 795 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 NUP153P49790 1475 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ISM1B1AKI9 464 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 NR4A1P22736 598 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CD86P42081 329 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CDK16Q00536 496 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 LAMTOR4Q0VGL1 99 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 BTG3Q14201 252 aaPredicted RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 VPS72Q15906 364 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 KCNT2Q6UVM3 1135 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PTCHD4Q6ZW05 846 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 AMER2Q8N7J2 671 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF248Q8NDW4 579 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 OR52K1Q8NGK4 314 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 SLC2A14Q8TDB8 520 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FATE1Q969F0 183 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FRMD8P1Q9BZ68 369 aaPredicted RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ASB8Q9H765 288 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 AASDHPPTQ9NRN7 309 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 MORF4L1Q9UBU8 362 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ZNF609O15014 1411 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 SLC28A2O43868 658 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 KRT36O76013 467 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PRKAR1AP10644 381 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FDPSP14324 419 aaKnown RBP12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 GFOD2Q3B7J2 385 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ITIH5Q86UX2 942 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 SLC34A3Q8N130 599 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CDYL2Q8N8U2 506 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 STK32AQ8WU08 396 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 IKZF2Q9UKS7 526 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 LOC110117498-PIK3R3F6TDL0 507 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 WRBO00258 174 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FBXO21O94952 628 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 FSBPO95073 299 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 NAMPTP43490 491 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 ANTXR2P58335 489 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 BROXQ5VW32 411 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 PPP1R14BQ96C90 147 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 CXorf40BQ96DE9 158 aa12.56□□□□□ -0.4
ARFGEF1-201ENST00000262215 DHRS7Q9Y394 339 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms