RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 YWHAQP27348 245 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 ATICP31939 592 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 ICAM3P32942 547 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 MAGEA12P43365 314 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 NDUFV1P49821 464 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 ESRRGP62508 458 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 NAB1Q13506 487 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 POU6F1Q14863 301 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 USP41Q3LFD5 358 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 REP15Q6BDI9 236 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 FBXL8Q96CD0 374 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 POMKQ9H5K3 350 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 TUBGCP4Q9UGJ1 667 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
LMNB1-201ENST00000261366 SCN1AP35498 2009 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 RNF103-CHMP3A0A140T963 221 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 EEF2KO00418 725 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 TADA2AO75478 443 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 NFKB1P19838 968 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CD247P20963 164 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ALDH3B2P48448 385 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 TXNL4AP83876 142 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 RHDQ02161 417 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ADIGQ0VDE8 80 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ADRM1Q16186 407 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ANO4Q32M45 955 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 MAP7D1Q3KQU3 841 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 PSTKQ8IV42 348 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 FBXO16Q8IX29 292 aaPredicted RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 RNF168Q8IYW5 571 aaPredicted RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CENPLQ8N0S6 344 aaPredicted RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 BBS5Q8N3I7 341 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 KDM1BQ8NB78 822 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 FBXL20Q96IG2 436 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CELF6Q96J87 481 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 GPR20Q99678 358 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ZNF385DQ9H6B1 395 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 PLGRKTQ9HBL7 147 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CACNA2D2Q9NY47 1150 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ADAM28Q9UKQ2 775 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 AHSGP02765 367 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 GNL1P36915 607 aaPredicted RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 C1QTNF8P60827 252 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 NEDD8Q15843 81 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 PKDCCQ504Y2 493 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 SYPL2Q5VXT5 272 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CLEC6AQ6EIG7 209 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CPSF7Q8N684 471 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 HMGCLL1Q8TB92 370 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ATXN3LQ9H3M9 355 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 SMOXQ9NWM0 555 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 GIMAP2Q9UG22 337 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 FZD10Q9ULW2 581 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 FER1L6Q2WGJ9 1857 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CLDN5O00501 218 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 GABRB3P28472 473 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 PTPN9P43378 593 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 PRKCQQ04759 706 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 BNIP3Q12983 259 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 FGD3Q5JSP0 725 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 CATSPERGQ6ZRH7 1159 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 TMEM26Q6ZUK4 368 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 TMEM135Q86UB9 458 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 IFNEQ86WN2 208 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 TXNDC5Q8NBS9 432 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 MLPHQ9BV36 600 aaPredicted RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 DUS2Q9NX74 493 aaKnown RBP16.09■□□□□ 0.17
LMNB1-201ENST00000261366 SELENONQ9NZV5 590 aa16.09■□□□□ 0.17
LMNB1-201ENST00000261366 ZNF638Q14966 1978 aaKnown RBP16.08■□□□□ 0.17
LMNB1-201ENST00000261366 HACD1B0YJ81 288 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 MRASO14807 208 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 CABYRO75952 493 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 ZBTB17Q13105 803 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 CSHL1Q14406 222 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 ZC3HC1Q86WB0 502 aaKnown RBP16.08■□□□□ 0.16
LMNB1-201ENST00000261366 TMEM126BQ8IUX1 230 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 CNTD1Q8N815 330 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 SPATA22Q8NHS9 363 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 FAM167AQ96KS9 214 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 C1QTNF1Q9BXJ1 281 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 VPS28Q9UK41 221 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 ACOT9Q9Y305 439 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 SH3PXD2BA1X283 911 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 UBDO15205 165 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 AP2A1O95782 977 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 PGK1P00558 417 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 JCHAINP01591 159 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 ERCC2P18074 760 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 LRPAP1P30533 357 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 MAGEA8P43361 318 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 TSTD2Q5T7W7 516 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 SLC26A9Q7LBE3 791 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 SPPL2CQ8IUH8 684 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 APOBEC3FQ8IUX4 373 aaKnown RBP16.08■□□□□ 0.16
LMNB1-201ENST00000261366 KCNN1Q92952 543 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 EXT2Q93063 718 aa16.08■□□□□ 0.16
LMNB1-201ENST00000261366 ELMO2Q96JJ3 720 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms