RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 KCNV2Q8TDN2 545 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 SEMA3CQ99985 751 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 PAK5Q9P286 719 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 RSPH14Q9UHP6 348 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 SLC8A2Q9UPR5 921 aa16.03■□□□□ 0.16
CCDC90B-201ENST00000260054 FAM187AA6NFU0 413 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 FAM170BA6NMN3 283 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 NPC1O15118 1278 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 DCXO43602 365 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 KLF8O95600 359 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 GSRP00390 522 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 MMP2P08253 660 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 SCNN1BP51168 640 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 SNRPD1P62314 119 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 MRPS21P82921 87 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 SIGLEC14Q08ET2 396 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 FAXCQ5TGI0 409 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 ITPRIPL1Q6GPH6 555 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 PKN3Q6P5Z2 889 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 DPY19L3Q6ZPD9 716 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 Q6ZS52 159 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 SYDE1Q6ZW31 735 aaPredicted RBP16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 TXNDC5Q8NBS9 432 aaKnown RBP16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 RPLP0P6Q8NHW5 317 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 EDAQ92838 391 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 VOPP1Q96AW1 172 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 LMAN1LQ9HAT1 526 aa16.02■□□□□ 0.16
CCDC90B-201ENST00000260054 INSIG1O15503 277 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 ADAM23O75077 832 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 IGSF6O95976 241 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 EPHX1P07099 455 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 NTSR1P30989 418 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 GKP32189 559 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 CCNHP51946 323 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 SLC7A5Q01650 507 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 GPS1Q13098 491 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 E2F5Q15329 346 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 PARP6Q2NL67 630 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 CARD16Q5EG05 197 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 C9orf64Q5T6V5 341 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 PRPF39Q86UA1 669 aaKnown RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 PLPP6Q8IY26 295 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 SPATA22Q8NHS9 363 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 ERLEC1Q96DZ1 483 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 IMP4Q96G21 291 aaKnown RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 OXNAD1Q96HP4 312 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 FCRL5Q96RD9 977 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 NUDCD1Q96RS6 583 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 RBM15Q96T37 977 aaKnown RBP eCLIP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 NELL2Q99435 816 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 GABRG3Q99928 467 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 SLC25A51Q9H1U9 297 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 ETNK1Q9HBU6 452 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 NOD2Q9HC29 1040 aa16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 HECAQ9UBI9 543 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 EVLQ9UI08 416 aaPredicted RBP16.02■□□□□ 0.15
CCDC90B-201ENST00000260054 TTC28Q96AY4 2481 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 EDDM13A0A1B0GTR0 161 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 SIN3BO75182 1162 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 MT-CYBP00156 380 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 IVDP26440 423 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 CD86P42081 329 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 CSNK1DP48730 415 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 LRRC32Q14392 662 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 SRLQ86TD4 932 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 RYBPQ8N488 228 aaPredicted RBP16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 CHST14Q8NCH0 376 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 HINFPQ9BQA5 517 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 SCUBE2Q9NQ36 999 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 RAB6BQ9NRW1 208 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 HAUS2Q9NVX0 235 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 UBP1Q9NZI7 540 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 ASIC3Q9UHC3 531 aa16.01■□□□□ 0.15
CCDC90B-201ENST00000260054 BDP1A6H8Y1 2624 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 STK25O00506 426 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 PDGFBP01127 241 aaPredicted RBP16■□□□□ 0.15
CCDC90B-201ENST00000260054 RECQLP46063 649 aaPredicted RBP16■□□□□ 0.15
CCDC90B-201ENST00000260054 SKOR1P84550 965 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 MYLK3Q32MK0 819 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 TEX35Q5T0J7 233 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 NCEH1Q6PIU2 408 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 C4orf22Q6V702 233 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 TRMT11Q7Z4G4 463 aaKnown RBP16■□□□□ 0.15
CCDC90B-201ENST00000260054 SYNPOQ8N3V7 929 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 PJA1Q8NG27 643 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 CCHCR1Q8TD31 782 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 TADA1Q96BN2 335 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 ERP44Q9BS26 406 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 MLPHQ9BV36 600 aaPredicted RBP16■□□□□ 0.15
CCDC90B-201ENST00000260054 TRIM31Q9BZY9 425 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 PRSS16Q9NQE7 514 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 SUN2Q9UH99 717 aa16■□□□□ 0.15
CCDC90B-201ENST00000260054 DMGDHQ9UI17 866 aaKnown RBP16■□□□□ 0.15
CCDC90B-201ENST00000260054 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 TARSL2A2RTX5 802 aaKnown RBP15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 EFCAB8A8MWE9 144 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 CTSLP07711 333 aa15.99■□□□□ 0.15
CCDC90B-201ENST00000260054 HOXB2P14652 356 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 271.3 ms