RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 CD53P19397 219 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 TBXAS1P24557 533 aaPredicted RBP5.31□□□□□ -1.56
TRA2B-201ENST00000259043 PDIA3P30101 505 aaKnown RBP5.31□□□□□ -1.56
TRA2B-201ENST00000259043 ADPRHP54922 357 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 BTBD16Q32M84 506 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 LDHAL6AQ6ZMR3 332 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 MEPCEQ7L2J0 689 aaKnown RBP5.31□□□□□ -1.56
TRA2B-201ENST00000259043 GPSM1Q86YR5 675 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 MYCT1Q8N699 235 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 SMRP1Q8NCR6 262 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 B4GALNT2Q8NHY0 566 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 LYZL4Q96KX0 146 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 FZD3Q9NPG1 666 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 PDE4DIPQ5VU43 2346 aa5.31□□□□□ -1.56
TRA2B-201ENST00000259043 TNRC18O15417 2968 aaPredicted RBP5.31□□□□□ -1.56
TRA2B-201ENST00000259043 MAP3K19Q56UN5 1328 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 DPPA5A6NC42 116 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 KCNJ18B7U540 433 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 SPTLC2O15270 562 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 NEURL1O76050 574 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 LARGE1O95461 756 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 SYF2O95926 243 aaKnown RBP5.3□□□□□ -1.56
TRA2B-201ENST00000259043 IFNA2P01563 188 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 MMP10P09238 476 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 HOXC9P31274 260 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 CIITAP33076 1130 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 CDK7P50613 346 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 PNLIPRP1P54315 467 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 P2RX3P56373 397 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 ITPK1Q13572 414 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 PTGR1Q14914 329 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 ZACNQ401N2 412 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 TTC39AQ5SRH9 613 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 KIAA1161Q6NSJ0 714 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 B4GALNT4Q76KP1 1039 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 TMEM174Q8WUU8 243 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 TRAPPC12Q8WVT3 735 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 ASB5Q8WWX0 329 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 NPAS1Q99742 590 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 KATNAL1Q9BW62 490 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 MAP6D1Q9H9H5 199 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 SLC8A2Q9UPR5 921 aa5.3□□□□□ -1.56
TRA2B-201ENST00000259043 DLEC1Q9Y238 1755 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 COL5A3P25940 1745 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 CXorf65A6NEN9 183 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 MBD3L5A6NJ08 208 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 MCIDASD6RGH6 385 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 MDM4O15151 490 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 ZC3H11AO75152 810 aaKnown RBP eCLIP5.29□□□□□ -1.563e-10■■□□□ 11.5
TRA2B-201ENST00000259043 GYS1P13807 737 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 HMGB2P26583 209 aaKnown RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 PPFIA1Q13136 1202 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 PFKFB4Q16877 469 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 CYB5R4Q7L1T6 521 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 ANKRD18AQ8IVF6 992 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 TMEM199Q8N511 208 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 PIGBQ92521 554 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 INPP5DQ92835 1189 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 GCC1Q96CN9 775 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 ADAD1Q96M93 576 aaKnown RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 RMDN3Q96TC7 470 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 SORBS1Q9BX66 1292 aaKnown RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 ZNF69Q9UC07 566 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 DTX4Q9Y2E6 619 aa5.29□□□□□ -1.56
TRA2B-201ENST00000259043 VIRMAQ69YN4 1812 aaKnown RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 KDM6AO15550 1401 aaPredicted RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 EDC4Q6P2E9 1401 aaKnown RBP5.29□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3DA0A087WVF3 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3IA0A087WXS9 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3EA0A087X179 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3KA0A087X1G2 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3BA6NDS4 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3FA6NER0 549 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3LB9A6J9 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 SYT5O00445 386 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 HEXIM1O94992 359 aaKnown RBP5.28□□□□□ -1.56
TRA2B-201ENST00000259043 NFATC1O95644 943 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3HP0C7X1 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 ARRB2P32121 409 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 ZBTB16Q05516 673 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 PPATQ06203 517 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 ERV3-1Q14264 604 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 ZNF569Q5MCW4 686 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 C10orf76Q5T2E6 689 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3GQ6DHY5 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3CQ6IPX1 549 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 LIN54Q6MZP7 749 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 LVRNQ6Q4G3 990 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TRAPPC11Q7Z392 1133 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TBC1D3Q8IZP1 549 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-201ENST00000259043 TEX19Q8NA77 164 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 HMGB4Q8WW32 186 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 RTKNQ9BST9 563 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 FRMD8Q9BZ67 464 aaPredicted RBP5.28□□□□□ -1.56
TRA2B-201ENST00000259043 PGAP2Q9UHJ9 254 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 FBXO4Q9UKT5 387 aa5.28□□□□□ -1.56
TRA2B-201ENST00000259043 DAPP1Q9UN19 280 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms