RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 CCNHP51946 323 aaPredicted RBP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 NEK3P51956 506 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 HNRNPKP61978 463 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 NFKB2Q00653 900 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 CLN3Q13286 438 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 DPY19L2P1Q6NXN4 242 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 B3GNT8Q7Z7M8 397 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 IRF2BP1Q8IU81 584 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 EXD3Q8N9H8 876 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 ZNF397Q8NF99 534 aaPredicted RBP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 IFT43Q96FT9 208 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 TIGD1Q96MW7 591 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 C2orf49Q9BVC5 232 aaPredicted RBP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 CLPBQ9H078 707 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 ZDHHC6Q9H6R6 413 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 FARP1Q9Y4F1 1045 aaPredicted RBP12.89□□□□□ -0.35
CSHL1-201ENST00000259003 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
CSHL1-201ENST00000259003 IGLV3-10A0A075B6K4 115 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 GOLGA6L4A6NEF3 574 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 NEMP2A6NFY4 417 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 B8ZZF3 427 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 K7ENP7 123 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 ITGB7P26010 798 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 PON1P27169 355 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 OR1E1P30953 314 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 IGFALSP35858 605 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 FLT3P36888 993 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 SERPINH1P50454 418 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 ADKP55263 362 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 PFN3P60673 137 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 DEUP1Q05D60 604 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 PAK1Q13153 545 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 TGIF1Q15583 401 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 ZSCAN23Q3MJ62 389 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 CARD16Q5EG05 197 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 KCTD16Q68DU8 428 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 ZCCHC8Q6NZY4 707 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 INO80CQ6PI98 192 aaPredicted RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 SETD3Q86TU7 594 aaPredicted RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 PARGQ86W56 976 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 DRC7Q8IY82 874 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 LSMEM2Q8N112 164 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 SNRNP27Q8WVK2 155 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 NT5C3BQ969T7 300 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 PPP1R9BQ96SB3 815 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 HEPHQ9BQS7 1158 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 C1QTNF2Q9BXJ5 285 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 TRIM4Q9C037 500 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
CSHL1-201ENST00000259003 THSD1Q9NS62 852 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 APEX2Q9UBZ4 518 aa12.88□□□□□ -0.35
CSHL1-201ENST00000259003 TNFSF15O95150 251 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 C6P13671 934 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 HGFP14210 728 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 RBMS1P29558 406 aaKnown RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 DUSP3P51452 185 aaPredicted RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 CLCN6P51797 869 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 LINC00303Q3SY05 128 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 PRRT3Q5FWE3 981 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 BRMS1LQ5PSV4 323 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 ATXN7L2Q5T6C5 722 aaPredicted RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 KIAA1161Q6NSJ0 714 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 PHLDB2Q86SQ0 1253 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 FAM131BQ86XD5 332 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 SFTPA2Q8IWL1 248 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 FUBP1Q96AE4 644 aaKnown RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 CENPTQ96BT3 561 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 WBP1Q96G27 269 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 FEM1CQ96JP0 617 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 CCDC114Q96M63 670 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 LRRC61Q9BV99 259 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 DUSP23Q9BVJ7 150 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 BOCQ9BWV1 1114 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 DPH1Q9BZG8 443 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 SYNDIG1Q9H7V2 258 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 ATP13A1Q9HD20 1204 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 WDR70Q9NW82 654 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 IPO11Q9UI26 975 aaKnown RBP12.87□□□□□ -0.35
CSHL1-201ENST00000259003 DNAJC12Q9UKB3 198 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 FLNCQ14315 2725 aa12.87□□□□□ -0.35
CSHL1-201ENST00000259003 BICDL2A1A5D9 508 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 ILVBLA1L0T0 632 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 C16orf96A6NNT2 1141 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 FAM72CH0Y354 149 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 GOLGA8SH3BPF8 625 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 SLC28A2O43868 658 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 MMP20O60882 483 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 GJB6O95452 261 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 GNA14O95837 355 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 TSHRP16473 764 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 RABIFP47224 123 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 UCNP55089 124 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 GNA12Q03113 381 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 NR0B2Q15466 257 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 FAM102AQ5T9C2 384 aaPredicted RBP12.86□□□□□ -0.35
CSHL1-201ENST00000259003 FAM72AQ5TYM5 149 aa12.86□□□□□ -0.35
CSHL1-201ENST00000259003 TAF3Q5VWG9 929 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms