RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 PDXPQ96GD0 296 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PIGSQ96S52 555 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CYTH2Q99418 400 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 FAM83CQ9BQN1 747 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PAPOLGQ9BWT3 736 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 HIPK3Q9H422 1215 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 JMJD4Q9H9V9 463 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 MRPL47Q9HD33 250 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 STRN4Q9NRL3 753 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 VPS45Q9NRW7 570 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 KCND2Q9NZV8 630 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 CD300AQ9UGN4 299 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ZMYM5Q9UJ78 669 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 SLC39A10Q9ULF5 831 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 PCDHA7Q9UN72 937 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 RRP7AQ9Y3A4 280 aaKnown RBP7.84□□□□□ -1.15
GPNMB-201ENST00000258733 ZHX2Q9Y6X8 837 aa7.84□□□□□ -1.15
GPNMB-201ENST00000258733 MYO5BQ9ULV0 1848 aa7.84□□□□□ -1.16
GPNMB-201ENST00000258733 ZMYM6O95789 1325 aa7.84□□□□□ -1.16
GPNMB-201ENST00000258733 MYH6P13533 1939 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 A0A1B0GV90 55 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 MASP2O00187 686 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 TXNL1O43396 289 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 FTCDO95954 541 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PROCP04070 461 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CDK1P06493 297 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 HOXD4P09016 255 aaPredicted RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 SRGAP2CP0DJJ0 459 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 EIF2S3P41091 472 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CLCNKBP51801 687 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 MYBPC1Q00872 1141 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CYP24A1Q07973 514 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ORC1Q13415 861 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 FLOT2Q14254 428 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ZNF267Q14586 743 aaPredicted RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KYNUQ16719 465 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KRTCAP3Q53RY4 240 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ZMAT1Q5H9K5 638 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 OGFOD3Q6PK18 319 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 SPATC1Q76KD6 591 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 HAUS6Q7Z4H7 955 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ADGRF2Q8IZF7 708 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KLHL6Q8WZ60 621 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CELF1Q92879 486 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 UFD1Q92890 307 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 MCUR1Q96AQ8 359 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 C14orf93Q9H972 538 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PKD2L2Q9NZM6 624 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PSMC3IPQ9P2W1 217 aaPredicted RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 DNMT3BQ9UBC3 853 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 SNX12Q9UMY4 172 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KNDC1Q76NI1 1749 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KLRG2A4D1S0 409 aaPredicted RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PITPNM1O00562 1244 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CLDN4O14493 209 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 DENRO43583 198 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 GRIN3BO60391 1043 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 RHOBTB1O94844 696 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CCNB2O95067 398 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KCNA5P22460 613 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PTAFRP25105 342 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CCR1P32246 355 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 HPCAL1P37235 193 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ALDH3B2P48448 385 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PPP3CCP48454 512 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 DNM2P50570 870 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 PSMD4P55036 377 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CLN3Q13286 438 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ADGRE1Q14246 886 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 AAK1Q2M2I8 961 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 LRRC24Q50LG9 513 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 LINC00523Q86TU6 105 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 LRRTM4Q86VH4 590 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 EIF1ADQ8N9N8 165 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 KBTBD3Q8NAB2 608 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 RFFLQ8WZ73 363 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 GTF2H4Q92759 462 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 C12orf43Q96C57 262 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ISOC1Q96CN7 298 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 BTBD10Q9BSF8 475 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 C19orf44Q9H6X5 657 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 INTS10Q9NVR2 710 aaKnown RBP7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ARHGAP28Q9P2N2 729 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 ZRANB1Q9UGI0 708 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CDC14AQ9UNH5 594 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 CCDC61Q9Y6R9 512 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 AOX1Q06278 1338 aa7.83□□□□□ -1.16
GPNMB-201ENST00000258733 STRCP1A6NGW2 1772 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 TRBV23-1A0A0A0MS06 115 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CTDSP2O14595 271 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 ANGPT2O15123 496 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 GSC2O15499 205 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 KERAO60938 352 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 FKBP6O75344 327 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CABYRO75952 493 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 STSP08842 583 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 MLNP12872 115 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CYP11B1P15538 503 aa7.82□□□□□ -1.16
GPNMB-201ENST00000258733 CYP2A7P20853 494 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms