RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 CLIC4Q9Y696 253 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KDM6AO15550 1401 aaPredicted RBP6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 PXDNQ92626 1479 aa6.83□□□□□ -1.32
PDGFRA-201ENST00000257290 KDM4FA0A1W2PPD8 638 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 H3BMM5 538 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PER2O15055 1255 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GGPS1O95749 300 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CD63P08962 238 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TXKP42681 527 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PRCPP42785 496 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 VASPP50552 380 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 YARSP54577 528 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 HERVK_113P63132 956 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TNFAIP1Q13829 316 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PRPSAP1Q14558 356 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF174Q15697 407 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 BRMS1LQ5PSV4 323 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 VWA5B1Q5TIE3 1220 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TMC3Q7Z5M5 1100 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TPH2Q8IWU9 490 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 HS6ST3Q8IZP7 471 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PQLC1Q8N2U9 271 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 FANCBQ8NB91 859 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SRFBP1Q8NEF9 429 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GATA6Q92908 595 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TMA16Q96EY4 203 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SPACA7Q96KW9 195 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 Q96MT0 163 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SNX18Q96RF0 628 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 DGCR6LQ9BY27 220 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PSMD13Q9UNM6 376 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GDAQ9Y2T3 454 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 DYRK1BQ9Y463 629 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 LGALS16A8MUM7 142 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 hCG_1984214I3L0E3 225 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 MCAMP43121 646 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GBE1Q04446 702 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM92BQ6ZTR7 304 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SPATA2LQ8IUW3 424 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 EMC1Q8N766 993 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 DNAJA4Q8WW22 397 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 REXO5Q96IC2 774 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ALPK1Q96QP1 1244 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 C9orf16Q9BUW7 83 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 RIBC2Q9H4K1 309 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZFYVE28Q9HCC9 887 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SDHAF2Q9NX18 166 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ENTPD4Q9Y227 616 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 NR2E3Q9Y5X4 410 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CCDC163A0A0D9SF12 145 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 C1orf196B1AJZ1 125 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GJB6O95452 261 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 IFNB1P01574 187 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 THRAP10827 490 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 RAB3BP20337 219 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 NMT1P30419 496 aaKnown RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GRK3P35626 688 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF135P52742 658 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 AQP4P55087 323 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ERVFC1P60507 584 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 OVGP1Q12889 678 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM26DQ5JW98 314 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 SLC38A6Q8IZM9 456 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 DEFB107AQ8IZN7 70 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 AGBL3Q8NEM8 1001 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 OR6B3Q8NGW1 331 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 EXT2Q93063 718 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 VPS25Q9BRG1 176 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 COA1Q9GZY4 146 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 XPR1Q9UBH6 696 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 TTC26A0AVF1 554 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ARGFXA6NJG6 315 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CYP2C18P33260 490 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 MMP13P45452 471 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 NEK3P51956 506 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 POLR2GP62487 172 aaKnown RBP eCLIP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 IL18R1Q13478 541 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF124Q15973 351 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PFKFB3Q16875 520 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF517Q6ZMY9 492 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 FAM178BQ8IXR5 827 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 LCORLQ8N3X6 602 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ASB15Q8WXK1 588 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 MAP6Q96JE9 813 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 POU2F3Q9UKI9 436 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 COG5Q9UP83 839 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 GINS2Q9Y248 185 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 EFCAB10A6NFE3 127 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 CBY3A6NI87 242 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 C19orf81C9J6K1 198 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 F8W036 122 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 K7ERI5 159 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 PDE2AO00408 941 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ZNF14P17017 642 aaPredicted RBP6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 ARHGAP17Q68EM7 881 aa6.82□□□□□ -1.32
PDGFRA-201ENST00000257290 OSTM1Q86WC4 334 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms