RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 TBC1D30Q9Y2I9 924 aa19.17■□□□□ 0.66
TRIM47-201ENST00000254816 ILVBLA1L0T0 632 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 GOLGA8RI6L899 631 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 CBX4O00257 560 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ALDH1A2O94788 518 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 WNT3AP56704 352 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 NR1H3Q13133 447 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ZNF235Q14590 738 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 POU6F1Q14863 301 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 SETD3Q86TU7 594 aaPredicted RBP19.16■□□□□ 0.66
TRIM47-201ENST00000254816 CCNJLQ8IV13 435 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ARRDC2Q8TBH0 407 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ZNF778Q96MU6 729 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 NAT9Q9BTE0 207 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 NSRP1Q9H0G5 558 aaKnown RBP19.16■□□□□ 0.66
TRIM47-201ENST00000254816 PLK2Q9NYY3 685 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 TRANK1O15050 2925 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 CCT8L1PA6NM43 557 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 KDELR3O43731 214 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ERVK-10P10266 1014 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 MZF1P28698 734 aaPredicted RBP19.16■□□□□ 0.66
TRIM47-201ENST00000254816 SCTRP47872 440 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 MPP3Q13368 585 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 TPGS1Q6ZTW0 290 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 SEMA3CQ99985 751 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 IL22Q9GZX6 179 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 RETREG1Q9H6L5 497 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 ACTL7BQ9Y614 415 aa19.16■□□□□ 0.66
TRIM47-201ENST00000254816 GFRA2O00451 464 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 F7P08709 466 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-201ENST00000254816 KRT4P19013 534 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 NMBRP28336 390 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 BMPR2Q13873 1038 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 ANKRD20A4Q4UJ75 823 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 SPANXN3Q5MJ09 141 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 TTC39BQ5VTQ0 682 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-201ENST00000254816 HTR3DQ70Z44 454 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 GRASPQ7Z6J2 395 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-201ENST00000254816 HJURPQ8NCD3 748 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-201ENST00000254816 RIN3Q8TB24 985 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 SMC6Q96SB8 1091 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 ACTR5Q9H9F9 607 aaPredicted RBP19.15■□□□□ 0.66
TRIM47-201ENST00000254816 HCFC2Q9Y5Z7 792 aa19.15■□□□□ 0.66
TRIM47-201ENST00000254816 IQANK1A0A1B0GTG1 560 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 SNAP91O60641 907 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 EPHA5P54756 1037 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 ERVK-21P61565 698 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 TNK2Q07912 1038 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 ITIH4Q14624 930 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 LINGO4Q6UY18 593 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 RANBP10Q6VN20 620 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 TMEM135Q86UB9 458 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 RNF135Q8IUD6 432 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 FAM217AQ8IXS0 508 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 SH3RF2Q8TEC5 729 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 DDI1Q8WTU0 396 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 CKAP2Q8WWK9 683 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 TTC17Q96AE7 1141 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 CERS2Q96G23 380 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 EXOC2Q96KP1 924 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 ACE2Q9BYF1 805 aaPredicted RBP19.14■□□□□ 0.66
TRIM47-201ENST00000254816 UBA2Q9UBT2 640 aaPredicted RBP19.14■□□□□ 0.66
TRIM47-201ENST00000254816 GGT7Q9UJ14 662 aa19.14■□□□□ 0.66
TRIM47-201ENST00000254816 ZCWPW2A0A1B0GU75 182 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 LUC7L3O95232 432 aaKnown RBP19.14■□□□□ 0.65
TRIM47-201ENST00000254816 HNRNPH1P31943 449 aaKnown RBP19.14■□□□□ 0.65
TRIM47-201ENST00000254816 LACTB2Q53H82 288 aaPredicted RBP19.14■□□□□ 0.65
TRIM47-201ENST00000254816 RASSF3Q86WH2 238 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 TDRD5Q8NAT2 981 aaKnown RBP19.14■□□□□ 0.65
TRIM47-201ENST00000254816 SERAC1Q96JX3 654 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 PPP1R2P1Q96PQ5 205 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 POLR1EQ9GZS1 481 aaKnown RBP19.14■□□□□ 0.65
TRIM47-201ENST00000254816 KDM4CQ9H3R0 1056 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 NKIRAS1Q9NYS0 192 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 CLEC4EQ9ULY5 219 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 SOX13Q9UN79 622 aa19.14■□□□□ 0.65
TRIM47-201ENST00000254816 CCDC195A0A1B0GUA6 201 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 TYW5A2RUC4 315 aaKnown RBP19.13■□□□□ 0.65
TRIM47-201ENST00000254816 TRIM49D1C9J1S8 452 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 SNX3O60493 162 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 USP1O94782 785 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 AVPR1AP37288 418 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 RGRP47804 291 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 ARF5P84085 180 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 POTEHQ6S545 545 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 CMTM8Q8IZV2 173 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.13■□□□□ 0.65
TRIM47-201ENST00000254816 ZNF599Q96NL3 588 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 PAIP2Q9BPZ3 127 aaKnown RBP19.13■□□□□ 0.65
TRIM47-201ENST00000254816 ABCF3Q9NUQ8 709 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 PSAT1Q9Y617 370 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 FAM237BA0A1B0GVD1 139 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 GOLGA8TH3BQL2 631 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 CSKP41240 450 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 CDH18Q13634 790 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 CYS1Q717R9 158 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 ING5Q8WYH8 240 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 ATP2A3Q93084 1043 aa19.13■□□□□ 0.65
TRIM47-201ENST00000254816 CINPQ9BW66 212 aaPredicted RBP19.13■□□□□ 0.65
TRIM47-201ENST00000254816 HAUS2Q9NVX0 235 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms