RNA–Protein interactions for RNA: ENST00000252599.8

COLGALT1-201, Transcript of collagen beta(1-O)galactosyltransferase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COLGALT1, Length 3,704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1-201ENST00000252599 PPM1NQ8N819 430 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 C4orf32Q8N8J7 132 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PCNPQ8WW12 178 aaKnown RBP13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 MASTLQ96GX5 879 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PRMT6Q96LA8 375 aaPredicted RBP13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PNMA5Q96PV4 448 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 ZNF341Q9BYN7 854 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 UCK2Q9BZX2 261 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 TMEM39BQ9GZU3 492 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 C8orf33Q9H7E9 229 aaPredicted RBP13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 BLOC1S4Q9NUP1 217 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 DNMT3LQ9UJW3 386 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PCDHB3Q9Y5E6 796 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 MAU2Q9Y6X3 613 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 MYH2Q9UKX2 1941 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PCM1Q15154 2024 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 TM7SF2O76062 418 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 ATE1O95260 518 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 CLUP10909 449 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 DNAJB2P25686 324 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PCBP1Q15365 356 aaKnown RBP eCLIP13.52□□□□□ -0.258e-6■□□□□ 10.9
COLGALT1-201ENST00000252599 FAM91A1Q658Y4 838 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 FBXL19Q6PCT2 694 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 CCDC116Q8IYX3 515 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 LPGAT1Q92604 370 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 POM121Q96HA1 1249 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 PFDN5Q99471 154 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 KIFC3Q9BVG8 833 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 COPG2Q9UBF2 871 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 NXF1Q9UBU9 619 aaKnown RBP13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 NAALADL1Q9UQQ1 740 aa13.52□□□□□ -0.25
COLGALT1-201ENST00000252599 C2CD2LO14523 706 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 HUS1O60921 280 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 CLPXO76031 633 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 JUPP14923 745 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 RXRBP28702 533 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 MPP7Q5T2T1 576 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 BROXQ5VW32 411 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ZNF544Q6NX49 715 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 AGMOQ6ZNB7 445 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 TP53I13Q8NBR0 393 aaPredicted RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ENKURQ8TC29 256 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 KCNK16Q96T55 309 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 CDC42EP4Q9H3Q1 356 aaKnown RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 KCNH7Q9NS40 1196 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 PLK2Q9NYY3 685 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ADAMTS6Q9UKP5 1117 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 CNOT11Q9UKZ1 510 aaKnown RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 E2F8A0AVK6 867 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 KCNN4O15554 427 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 TNNC2P02585 160 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 RNF224P0DH78 156 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 RNF4P78317 190 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 KRT17Q04695 432 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 TRIM32Q13049 653 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ECM1Q16610 540 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 AASDHQ4L235 1098 aaPredicted RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 KLHL12Q53G59 568 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ESCO2Q56NI9 601 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ETFRF1Q6IPR1 90 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 FRMD7Q6ZUT3 714 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 IFNEQ86WN2 208 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 OR10Z1Q8NGY1 313 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 TCEAL3Q969E4 200 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 OXNAD1Q96HP4 312 aaPredicted RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 WWP1Q9H0M0 922 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 PLSCR3Q9NRY6 295 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 RDH8Q9NYR8 311 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 IL20Q9NYY1 176 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 PADI4Q9UM07 663 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 C5P01031 1676 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 SOBPA7XYQ1 873 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 POM121CA8CG34 1229 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 LCKP06239 509 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 SMIM18P0DKX4 95 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ALDH4A1P30038 563 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 TSPAN7P41732 249 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ERVK-25P63136 954 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 SLC18A2Q05940 514 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 POLD3Q15054 466 aaPredicted RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 CCDC85BQ15834 202 aaPredicted RBP13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ZBED5Q49AG3 693 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 MIIPQ5JXC2 388 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 FAM102BQ5T8I3 360 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 PM20D1Q6GTS8 502 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ZBTB49Q6ZSB9 765 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 EGLN2Q96KS0 407 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 NAT9Q9BTE0 207 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ERVK-6Q9BXR3 956 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 NMUR2Q9GZQ4 415 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 MANSC1Q9H8J5 431 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 NIT2Q9NQR4 276 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 GLTPQ9NZD2 209 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 ERVK-18Q9QC07 812 aa13.51□□□□□ -0.25
COLGALT1-201ENST00000252599 SLIT3O75094 1523 aa13.5□□□□□ -0.25
COLGALT1-201ENST00000252599 MIF4GDA9UHW6 222 aaKnown RBP13.5□□□□□ -0.25
COLGALT1-201ENST00000252599 EDF1O60869 148 aaKnown RBP13.5□□□□□ -0.25
COLGALT1-201ENST00000252599 AXLP30530 894 aa13.5□□□□□ -0.25
COLGALT1-201ENST00000252599 TRAP1Q12931 704 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms