RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 FAM96AQ9H5X1 160 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 VPS45Q9NRW7 570 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 MID2Q9UJV3 735 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 HOXA2O43364 376 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 APOA4P06727 396 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 ENO1P06733 434 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 MMP2P08253 660 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC35E2BP0CK96 405 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 EZRP15311 586 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 CD86P42081 329 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC1A2P43004 574 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 POLD2P49005 469 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 TNK2Q07912 1038 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 TBCCQ15814 346 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 NAPRTQ6XQN6 538 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 ANKS3Q6ZW76 656 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 LCA5Q86VQ0 697 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 CIR1Q86X95 450 aaPredicted RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC25A41Q8N5S1 370 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 C2orf15Q8WU43 125 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 BCL7CQ8WUZ0 217 aaPredicted RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 RPRD1AQ96P16 312 aaPredicted RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 MRPL9Q9BYD2 267 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 UBE2OQ9C0C9 1292 aaKnown RBP25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 CCSER2Q9H7U1 834 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 DNAJC28Q9NX36 388 aa25.49■■□□□ 1.67
TMEM55B-201ENST00000250489 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 PITPNM1O00562 1244 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 GM2AP17900 193 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 DSC2Q02487 901 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 ITKQ08881 620 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 THOC5Q13769 683 aaKnown RBP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 ACBD5Q5T8D3 534 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 MFSD6LQ8IWD5 586 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 C2CD4AQ8NCU7 369 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 GIPC2Q8TF65 315 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 TTPALQ9BTX7 342 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 DENND2DQ9H6A0 471 aaPredicted RBP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 TASP1Q9H6P5 420 aa25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 SDAD1Q9NVU7 687 aaKnown RBP eCLIP25.48■■□□□ 1.67
TMEM55B-201ENST00000250489 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TBKBP1A7MCY6 615 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TMEM114B3SHH9 223 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 ZNF195O14628 629 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TRIM13O60858 407 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 RAMP2O60895 175 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 PEX11AO75192 247 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 PGGT1BP53609 377 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC12A1Q13621 1099 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 IHHQ14623 411 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 RABGAP1LQ5R372 815 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 NADSYN1Q6IA69 706 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 PRSS55Q6UWB4 352 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 ZNF354CQ86Y25 554 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TMEM151AQ8N4L1 468 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TEX9Q8N6V9 391 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 RDH11Q8TC12 318 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 SREK1Q8WXA9 508 aaKnown RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 RANBP9Q96S59 729 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 FAM167BQ9BTA0 163 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 ACE2Q9BYF1 805 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 EBF2Q9HAK2 575 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 CPSF2Q9P2I0 782 aaKnown RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TAGLN3Q9UI15 199 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 SORCS3Q9UPU3 1222 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 EPB41L3Q9Y2J2 1087 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 FAM95CA0A1B0GW59 222 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 HEATR9A2RTY3 570 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 SLC38A8A6NNN8 435 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TLR5O60602 858 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 H2AFYO75367 372 aaKnown RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 ATF6P18850 670 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 DNAJB1P25685 340 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 AVPR1AP37288 418 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 IDH3AP50213 366 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 SERPINH1P50454 418 aaKnown RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 IL10RBQ08334 325 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 POLD3Q15054 466 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 PARP15Q460N3 678 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 RFWD3Q6PCD5 774 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 NSMCE1Q8WV22 266 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 MYEOVQ96EZ4 313 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 TSNARE1Q96NA8 513 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 OXCT2Q9BYC2 517 aaPredicted RBP25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 OXSMQ9NWU1 459 aa25.47■■□□□ 1.67
TMEM55B-201ENST00000250489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 PRR5-ARHGAP8B1AHC4 643 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 SBK3P0C264 359 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 COL6A2P12110 1019 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 CPA2P48052 419 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 ARHGAP8P85298 464 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 UBAP2LQ14157 1087 aaKnown RBP25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 ZNF470Q6ECI4 717 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 ZYG11AQ6WRX3 759 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 CENPLQ8N0S6 344 aaPredicted RBP25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 KCTD4Q8WVF5 259 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 TADA1Q96BN2 335 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 APOBEC2Q9Y235 224 aaKnown RBP25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 CDY1Q9Y6F8 540 aa25.46■■□□□ 1.67
TMEM55B-201ENST00000250489 TET1Q8NFU7 2136 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms