RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 TAS2R40P59535 323 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 GRM3Q14832 879 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 POM121L1PQ3SYA9 428 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 C1orf216Q8TAB5 229 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 MFHAS1Q9Y4C4 1052 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 EPN1Q9Y6I3 576 aaPredicted RBP24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 PCDH15Q96QU1 1955 aa24.73■■□□□ 1.55
SDF2L1-201ENST00000248958 FRYLO94915 3013 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 SPTBN4Q9H254 2564 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 GOLGA6L6A8MZA4 724 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 J3KR12 359 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 NDUFA10O95299 355 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 IL4RP24394 825 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 GJC1P36383 396 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 NEK3P51956 506 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 DPYSL3Q14195 570 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 CYTH1Q15438 398 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 TEAD4Q15561 434 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 ZFYVE27Q5T4F4 411 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 PIP5KL1Q5T9C9 394 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 TMCO4Q5TGY1 634 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 PRPF39Q86UA1 669 aaKnown RBP24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 TRIM69Q86WT6 500 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 LRRC49Q8IUZ0 686 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 CALR3Q96L12 384 aaKnown RBP24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 ZNF599Q96NL3 588 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 CALN1Q9BXU9 219 aa24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 IPO11Q9UI26 975 aaKnown RBP24.72■■□□□ 1.55
SDF2L1-201ENST00000248958 ADAMTS9Q9P2N4 1935 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 A0A0A6YYK5 440 aaPredicted RBP24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 PLK4O00444 970 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 KRIT1O00522 736 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 PALMO75781 387 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 NOP2P46087 812 aaKnown RBP24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 AFF3P51826 1226 aaKnown RBP24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 ATP13A4Q4VNC1 1196 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 ZNF805Q5CZA5 627 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 LRRC38Q5VT99 294 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 FBXL19Q6PCT2 694 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 VSIG1Q86XK7 387 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 RAB7BQ96AH8 199 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 CPEB1Q9BZB8 566 aaKnown RBP24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 ETNK2Q9NVF9 386 aa24.71■■□□□ 1.55
SDF2L1-201ENST00000248958 SOWAHDA6NJG2 315 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 ZNF487B1APH4 448 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 CDX4O14627 284 aaPredicted RBP24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 LATO43561 262 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 GRIA4P48058 902 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 CSNK1DP48730 415 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 RACK1P63244 317 aaKnown RBP24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 IL27RAQ6UWB1 636 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 ZSCAN30Q86W11 494 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 CPNE8Q86YQ8 564 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 SKA1Q96BD8 255 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 ORAI3Q9BRQ5 295 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 CINPQ9BW66 212 aaPredicted RBP24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 TM9SF3Q9HD45 589 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 LHX3Q9UBR4 397 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 DMTF1Q9Y222 760 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 PLXNA2O75051 1894 aa24.7■■□□□ 1.54
SDF2L1-201ENST00000248958 C4orf47A7E2U8 309 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 CD48P09326 243 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 ADRB3P13945 408 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 KDELR1P24390 212 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 RENBPP51606 427 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 TAS2R38P59533 333 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 NSUN2Q08J23 767 aaKnown RBP eCLIP24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 MMRN1Q13201 1228 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 PAFAH1B3Q15102 231 aaKnown RBP24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 ANKRD20A8PQ5CZ79 823 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 ATXN7L2Q5T6C5 722 aaPredicted RBP24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 GDPD4Q6W3E5 623 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 RHOT1Q8IXI2 618 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 OR6K2Q8NGY2 324 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 HCAR2Q8TDS4 363 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 NSMCE1Q8WV22 266 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 FAF2Q96CS3 445 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 BAG1Q99933 345 aaPredicted RBP24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 DDX56Q9NY93 547 aaKnown RBP24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 DCHS1Q96JQ0 3298 aa24.69■■□□□ 1.54
SDF2L1-201ENST00000248958 AP1G1O43747 822 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 FOXK2Q01167 660 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 ODF2Q5BJF6 829 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 SLC45A4Q5BKX6 768 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 BBS5Q8N3I7 341 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 ATPAF2Q8N5M1 289 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 GTPBP2Q9BX10 602 aaKnown RBP24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 SEPT3Q9UH03 358 aa24.68■■□□□ 1.54
SDF2L1-201ENST00000248958 C16orf96A6NNT2 1141 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 RNF103O00237 685 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 SPOPO43791 374 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 RNGTTO60942 597 aaKnown RBP24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 UGT2B4P06133 528 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 GKP32189 559 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 HSPA9P38646 679 aaKnown RBP24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 MAPK8P45983 427 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 PPP2CBP62714 309 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 PPP2CAP67775 309 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 GRIK2Q13002 908 aa24.67■■□□□ 1.54
SDF2L1-201ENST00000248958 LBRQ14739 615 aaKnown RBP24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms