RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 ADAM28Q9UKQ2 775 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SERPINA6P08185 405 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 CD1EP15812 388 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 CYP2C18P33260 490 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 DSC1Q08554 894 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TAF10Q12962 218 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TUBB3Q13509 450 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 CCDC153Q494R4 210 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ZNF789Q5FWF6 425 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 PDPK2PQ6A1A2 396 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 MON1AQ86VX9 555 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 IGSF8Q969P0 613 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 MYEOVQ96EZ4 313 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ELMO2Q96JJ3 720 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 STARD7Q9NQZ5 370 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TET1Q8NFU7 2136 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 HNRNPCL1O60812 293 aaKnown RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SIN3BO75182 1162 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 INSCQ1MX18 579 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 ANO4Q32M45 955 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SLC9B1Q4ZJI4 515 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 MS4A13Q5J8X5 152 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 PHTF2Q8N3S3 785 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 TSGA13Q96PP4 275 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 WDR55Q9H6Y2 383 aaPredicted RBP15.96■□□□□ 0.15
LRFN1-201ENST00000248668 COG4Q9H9E3 785 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 FIS1Q9Y3D6 152 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 PCDHB5Q9Y5E4 795 aa15.96■□□□□ 0.15
LRFN1-201ENST00000248668 SLC12A8A0AV02 714 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 DCXO43602 365 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 GRK2P25098 689 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 ZNF135P52742 658 aaPredicted RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 NAGLUP54802 743 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 GEMP55040 296 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 WASHC2DQ5SRD0 308 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 STXBP5Q5T5C0 1151 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TRAF7Q6Q0C0 670 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RSPO2Q6UXX9 243 aaPredicted RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CFAP52Q8N1V2 620 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 B4GALNT2Q8NHY0 566 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RAET1EQ8TD07 263 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RHOJQ9H4E5 214 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 SP110Q9HB58 689 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 ACTL7AQ9Y615 435 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 WFS1O76024 890 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 SORBS2O94875 1100 aaKnown RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 MAGEA12P43365 314 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 PTDSS1P48651 473 aaKnown RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RALGPS1Q5JS13 557 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TMEM173Q86WV6 379 aaPredicted RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CCNYL1Q8N7R7 359 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 DBF4BQ8NFT6 615 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 NXNL1Q96CM4 212 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TSNARE1Q96NA8 513 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RPRD1AQ96P16 312 aaPredicted RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 PCDH10Q9P2E7 1040 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 FAM95CA0A1B0GW59 222 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TRIM13O60858 407 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 MPOP05164 745 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 PIRTP0C851 137 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 SLC35E2BP0CK96 405 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CSE1LP55060 971 aaKnown RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 IHHQ14623 411 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 RASIP1Q5U651 963 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CNSTQ6PJW8 725 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TDRD5Q8NAT2 981 aaKnown RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 FAM136AQ96C01 138 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CCDC124Q96CT7 223 aaKnown RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 GPR22Q99680 433 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 CCSER2Q9H7U1 834 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 PACSIN3Q9UKS6 424 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 MTF2Q9Y483 593 aaPredicted RBP15.95■□□□□ 0.14
LRFN1-201ENST00000248668 TCAF1Q9Y4C2 921 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 NLRC5Q86WI3 1866 aa15.95■□□□□ 0.14
LRFN1-201ENST00000248668 PTPRDP23468 1912 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 MYO16Q9Y6X6 1858 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 ARHGEF37A1IGU5 675 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 NEMP2A6NFY4 417 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 OR51F1A6NGY5 319 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 OAZ2O95190 189 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 EPHB1P54762 984 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 DUSP4Q13115 394 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 PTPRCAPQ14761 206 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 RBM20Q5T481 1227 aaKnown RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 FBXL22Q6P050 247 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 RPS27LQ71UM5 84 aaKnown RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 PTAR1Q7Z6K3 402 aaPredicted RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 CLEC14AQ86T13 490 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 SCML4Q8N228 414 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 FSTL5Q8N475 847 aaPredicted RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 LZTR1Q8N653 840 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 TTC16Q8NEE8 873 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 CFAP61Q8NHU2 1237 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 MARCH2Q9P0N8 246 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 XPR1Q9UBH6 696 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 SCML2Q9UQR0 700 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 SCAMP3O14828 347 aaKnown RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 RPLP2P05387 115 aaKnown RBP15.94■□□□□ 0.14
LRFN1-201ENST00000248668 YWHAQP27348 245 aa15.94■□□□□ 0.14
LRFN1-201ENST00000248668 GRIA4P48058 902 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms