RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 C20orf96Q9NUD7 363 aaPredicted RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 TBC1D30Q9Y2I9 924 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 MTCL1Q9Y4B5 1905 aaKnown RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 PRRC2BQ5JSZ5 2229 aaKnown RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 ILVBLA1L0T0 632 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 GFRA2O00451 464 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 ZWINTO95229 277 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 ALDOAP04075 364 aaKnown RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 CKMP06732 381 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 IL9RQ01113 521 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 MSLNQ13421 630 aaPredicted RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 PCID2Q5JVF3 399 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 LGSNQ5TDP6 509 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 CHST9Q7L1S5 443 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 KCNMB4Q86W47 210 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 RNF135Q8IUD6 432 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 CARNMT1Q8N4J0 409 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 PHOSPHO2Q8TCD6 241 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 MICAL1Q8TDZ2 1067 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 ALKBH8Q96BT7 664 aaKnown RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 SEC16BQ96JE7 1060 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 EXOC2Q96KP1 924 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 FAM111AQ96PZ2 611 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 SLC46A2Q9BY10 475 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 TLR9Q9NR96 1032 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 IARS2Q9NSE4 1012 aaKnown RBP13.6□□□□□ -0.23
NUP85-201ENST00000245544 PCMTD2Q9NV79 361 aa13.6□□□□□ -0.23
NUP85-201ENST00000245544 SPTBN5Q9NRC6 3674 aaKnown RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 CBX4O00257 560 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 KDELR3O43731 214 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 SNAP91O60641 907 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 C1RP00736 705 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 ITGA2BP08514 1039 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 ARNTP27540 789 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 MZF1P28698 734 aaPredicted RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 ETV4P43268 484 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 SERPINB9P50453 376 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 OXCT1P55809 520 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 ZNF235Q14590 738 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 HHATQ5VTY9 493 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 LINGO4Q6UY18 593 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 STRA8Q7Z7C7 330 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 MTBPQ96DY7 904 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 SRPK1Q96SB4 655 aaKnown RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 ELAC2Q9BQ52 826 aaKnown RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 ACE2Q9BYF1 805 aaPredicted RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 POLR1EQ9GZS1 481 aaKnown RBP13.59□□□□□ -0.23
NUP85-201ENST00000245544 MUC3BQ9H195 1237 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 ARNT2Q9HBZ2 717 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 CFAP97Q9P2B7 532 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 LZTS1Q9Y250 596 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 CCL26Q9Y258 94 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 TCAF1Q9Y4C2 921 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 XIRP2A4UGR9 3374 aa13.59□□□□□ -0.23
NUP85-201ENST00000245544 AP3B1O00203 1094 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 COPEO14579 308 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 EPCAMP16422 314 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 CCNFP41002 786 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 DNAJC3Q13217 504 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 SEPT6Q14141 434 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 FRG1Q14331 258 aaKnown RBP13.58□□□□□ -0.23
NUP85-201ENST00000245544 SIRPB2Q5JXA9 342 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 PPM1LQ5SGD2 360 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 C9orf50Q5SZB4 431 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 CGB2Q6NT52 195 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 FAM47EQ6ZV65 393 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 PIGWQ7Z7B1 504 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 SETD3Q86TU7 594 aaPredicted RBP13.58□□□□□ -0.23
NUP85-201ENST00000245544 BBS7Q8IWZ6 715 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 ACVR1CQ8NER5 493 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 SLCO1B3Q9NPD5 702 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 VPS45Q9NRW7 570 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 PLK2Q9NYY3 685 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 CLEC4EQ9ULY5 219 aa13.58□□□□□ -0.23
NUP85-201ENST00000245544 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 E2F8A0AVK6 867 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 ANKRD65E5RJM6 399 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 EBAG9O00559 213 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 TPP1O14773 563 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 TM9SF1O15321 606 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 VAPBO95292 243 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 CD160O95971 181 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 PRKCGP05129 697 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 ATXN1LP0C7T5 689 aaKnown RBP13.58□□□□□ -0.24
NUP85-201ENST00000245544 GP5P40197 560 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 ARCN1P48444 511 aaKnown RBP13.58□□□□□ -0.24
NUP85-201ENST00000245544 ARF5P84085 180 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 NAB1Q13506 487 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 CYTH1Q15438 398 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 CNGA3Q16281 694 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 POTEHQ6S545 545 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 TIFABQ6ZNK6 161 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 NDUFAF2Q8N183 169 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 PPHLN1Q8NEY8 458 aaKnown RBP13.58□□□□□ -0.24
NUP85-201ENST00000245544 RIN3Q8TB24 985 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 SHKBP1Q8TBC3 707 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 TMA16Q96EY4 203 aaKnown RBP13.58□□□□□ -0.24
NUP85-201ENST00000245544 ZNF599Q96NL3 588 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 PPP1R2P1Q96PQ5 205 aa13.58□□□□□ -0.24
NUP85-201ENST00000245544 NOD2Q9HC29 1040 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms