RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 RAB30Q15771 203 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 PCSK7Q16549 785 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 TUBB8Q3ZCM7 444 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ANKRD20A4Q4UJ75 823 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 KDELC2Q7Z4H8 507 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 BBS5Q8N3I7 341 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 KIFC1Q9BW19 673 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 UGT1A7Q9HAW7 530 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 UGT1A10Q9HAW8 530 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 UGT1A8Q9HAW9 530 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 CHRAC1Q9NRG0 131 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ZMYM5Q9UJ78 669 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF180Q9UJW8 692 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 SOX13Q9UN79 622 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 IKBKGQ9Y6K9 419 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 FAM169AQ9Y6X4 670 aa15.43■□□□□ 0.06
HDHD3-201ENST00000238379 A0A1W2PPM1 405 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 FAM155BO75949 473 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 BRAFP15056 766 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 CEBPBP17676 345 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 CSKP41240 450 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 GNGT1P63211 74 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 FRG1Q14331 258 aaKnown RBP15.42■□□□□ 0.06
HDHD3-201ENST00000238379 CYTH1Q15438 398 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 PCID2Q5JVF3 399 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 TPGS1Q6ZTW0 290 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 MFN1Q8IWA4 741 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 C12orf76Q8N812 135 aaPredicted RBP15.42■□□□□ 0.06
HDHD3-201ENST00000238379 VN1R2Q8NFZ6 395 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 SMG7Q92540 1137 aaKnown RBP15.42■□□□□ 0.06
HDHD3-201ENST00000238379 MFSD3Q96ES6 412 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 SLC28A3Q9HAS3 691 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 PLK2Q9NYY3 685 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.42■□□□□ 0.06
HDHD3-201ENST00000238379 SENP1Q9P0U3 644 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 VPS28Q9UK41 221 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 CLEC4EQ9ULY5 219 aa15.42■□□□□ 0.06
HDHD3-201ENST00000238379 MRPS23Q9Y3D9 190 aaKnown RBP15.42■□□□□ 0.06
HDHD3-201ENST00000238379 LOC285095A0A1B0GVY8 99 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 TMEM120BA0PK00 339 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 CHN1P15882 459 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 RGRP47804 291 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 MGAT5Q09328 741 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 MPP2Q14168 576 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 CBX2Q14781 532 aaPredicted RBP15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF77Q15935 545 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 FYB2Q5VWT5 728 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF449Q6P9G9 518 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDHD3-201ENST00000238379 FIBINQ8TAL6 211 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ITFG1Q8TB96 612 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ING5Q8WYH8 240 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF669Q96BR6 464 aaPredicted RBP15.41■□□□□ 0.06
HDHD3-201ENST00000238379 CERS2Q96G23 380 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 ZNF778Q96MU6 729 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 CINPQ9BW66 212 aaPredicted RBP15.41■□□□□ 0.06
HDHD3-201ENST00000238379 TRABDQ9H4I3 376 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 KIF9Q9HAQ2 790 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 PIDD1Q9HB75 910 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 HAUS2Q9NVX0 235 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 LAMA3Q16787 3333 aa15.41■□□□□ 0.06
HDHD3-201ENST00000238379 TCF3P15923 654 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 CR2P20023 1033 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 NMBRP28336 390 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 MSLNQ13421 630 aaPredicted RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 POU6F1Q14863 301 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 SLC1A5Q15758 541 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 PKN3Q6P5Z2 889 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 TMC5Q6UXY8 1006 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 LINGO4Q6UY18 593 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 MARK2Q7KZI7 788 aaKnown RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 ARID3BQ8IVW6 561 aaPredicted RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 APCDD1Q8J025 514 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 DCAF4L2Q8NA75 395 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 NSMCE3Q96MG7 304 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 PPANQ9NQ55 473 aaKnown RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 VPS51Q9UID3 782 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 IQANK1A0A1B0GTG1 560 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 EPOP01588 193 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 CYBBP04839 570 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 ATXN1LP0C7T5 689 aaKnown RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 ERVK-10P10266 1014 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 USP4Q13107 963 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 SLC14A2Q15849 920 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 INO80DQ53TQ3 878 aaPredicted RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 TMEM25Q86YD3 366 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 SLC25A41Q8N5S1 370 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 PTCD2Q8WV60 388 aaKnown RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 CDKL2Q92772 493 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 CENPTQ96BT3 561 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 NOD2Q9HC29 1040 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 IL1RAPL1Q9NZN1 696 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 KIAA1522Q9P206 1035 aaPredicted RBP15.4■□□□□ 0.06
HDHD3-201ENST00000238379 SLC17A6Q9P2U8 582 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 TCAF1Q9Y4C2 921 aa15.4■□□□□ 0.06
HDHD3-201ENST00000238379 TMCC1O94876 653 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 SERPINF2P08697 491 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 ADRA1DP25100 572 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 LSP1P33241 339 aa15.39■□□□□ 0.05
HDHD3-201ENST00000238379 LMAN2Q12907 356 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms