RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 NME3Q13232 169 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CHSY3Q70JA7 882 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 BNIPLQ7Z465 357 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 ZNF554Q86TJ5 538 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 FBXO16Q8IX29 292 aaPredicted RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 CRYBG2Q8N1P7 616 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 LINC01465Q8N7H1 131 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 HM13Q8TCT9 377 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 C18orf25Q96B23 403 aaPredicted RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 DUS3LQ96G46 650 aaKnown RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 NPY6RQ99463 290 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CLK4Q9HAZ1 481 aaKnown RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 RNF19AQ9NV58 838 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 UBP1Q9NZI7 540 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 FAM155AB1AL88 458 aaPredicted RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 CYP2C9P11712 490 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 COL6A2P12110 1019 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 YBX3P16989 372 aaKnown RBP eCLIP15.7■□□□□ 0.1
DDX55-201ENST00000238146 NFKB1P19838 968 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 RPL10P27635 214 aaKnown RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 GRM5P41594 1212 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 ADIGQ0VDE8 80 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 ZBTB17Q13105 803 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 NHSL2Q5HYW2 709 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 SYPL2Q5VXT5 272 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CNSTQ6PJW8 725 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CEP97Q8IW35 865 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 LRRC43Q8N309 656 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 SPPL2BQ8TCT7 592 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 PIGVQ9NUD9 493 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 CD300AQ9UGN4 299 aa15.7■□□□□ 0.1
DDX55-201ENST00000238146 FAF1Q9UNN5 650 aaPredicted RBP15.7■□□□□ 0.1
DDX55-201ENST00000238146 NPHS1O60500 1241 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 DAB1O75553 588 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 BMP10O95393 424 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 HNRNPLP14866 589 aaKnown RBP eCLIP15.69■□□□□ 0.1
DDX55-201ENST00000238146 REP15Q6BDI9 236 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 ZBTB49Q6ZSB9 765 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 PIGZQ86VD9 579 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 FAM47BQ8NA70 645 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 TXNDC5Q8NBS9 432 aaKnown RBP15.69■□□□□ 0.1
DDX55-201ENST00000238146 TRPC4APQ8TEL6 797 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 LRRC4Q9HBW1 653 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 NSMCE4AQ9NXX6 385 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 ERAP1Q9NZ08 941 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 NCKIPSDQ9NZQ3 722 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 CNOT6Q9ULM6 557 aaKnown RBP15.69■□□□□ 0.1
DDX55-201ENST00000238146 SLC8A2Q9UPR5 921 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 FIS1Q9Y3D6 152 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 NOS2P35228 1153 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 GMPSP49915 693 aaPredicted RBP15.69■□□□□ 0.1
DDX55-201ENST00000238146 ENTPD1P49961 510 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 C6orf10Q5SRN2 563 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 CROCCP3Q8IVE0 287 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 MFSD6LQ8IWD5 586 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 NPWQ8N729 165 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 LRRC52Q8N7C0 313 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 RNF169Q8NCN4 708 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 SGF29Q96ES7 293 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 OSBPL2Q9H1P3 480 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 SPAG4Q9NPE6 437 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 GTSE1Q9NYZ3 720 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 CCDC167Q9P0B6 97 aa15.69■□□□□ 0.1
DDX55-201ENST00000238146 TKTP29401 623 aaKnown RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 GNL1P36915 607 aaPredicted RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 RAB10P61026 200 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 FASTKQ14296 549 aaKnown RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 ZBTB6Q15916 424 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 AGKQ53H12 422 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 ZNF484Q5JVG2 852 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 ZNF618Q5T7W0 954 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 PPP4R4Q6NUP7 873 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 DENND6AQ8IWF6 608 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 TFAP2CQ92754 450 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 PPWD1Q96BP3 646 aaKnown RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 KIFC1Q9BW19 673 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 FTHL17Q9BXU8 183 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 OSBPL6Q9BZF3 934 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 PLGRKTQ9HBL7 147 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 ANLNQ9NQW6 1124 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 SNTG2Q9NY99 539 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 EBF1Q9UH73 591 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 ZNHIT2Q9UHR6 403 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 A0A0G2JMZ2 1700 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 SH3PXD2BA1X283 911 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 I6L893 689 aaPredicted RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 PSMD12O00232 456 aaPredicted RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 SOCS2O14508 198 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 TIPRLO75663 272 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 TXNP10599 105 aaKnown RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 RPS12P25398 132 aaKnown RBP15.68■□□□□ 0.1
DDX55-201ENST00000238146 DNAJB1P25685 340 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 NUP107P57740 925 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 CTBSQ01459 385 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 CTBP1Q13363 440 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 EML3Q32P44 896 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 Q3C1V9 767 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 ITPRIPL1Q6GPH6 555 aa15.68■□□□□ 0.1
DDX55-201ENST00000238146 PDZD4Q76G19 769 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms