RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
MSH2-201ENST00000233146 VPS4AQ9UN37 437 aa13.18□□□□□ -0.3
MSH2-201ENST00000233146 TCAF2A6NFQ2 919 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.17□□□□□ -0.3
MSH2-201ENST00000233146 BET1O15155 118 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TRIM24O15164 1050 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PRLP01236 227 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 DBTP11182 482 aaKnown RBP13.17□□□□□ -0.3
MSH2-201ENST00000233146 CCNCP24863 283 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 CYP2C18P33260 490 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 CBX5P45973 191 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 POLD2P49005 469 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 ATP6AP1Q15904 470 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 DGUOKQ16854 277 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 STEAP3Q658P3 488 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 ZNF544Q6NX49 715 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 BBS12Q6ZW61 710 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 ZNF438Q7Z4V0 828 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 FIZ1Q96SL8 496 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TM9SF2Q99805 663 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TOPORSQ9NS56 1045 aaPredicted RBP13.17□□□□□ -0.3
MSH2-201ENST00000233146 IL37Q9NZH6 218 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 RIPK3Q9Y572 518 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PLIN4Q96Q06 1357 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PRKCGP05129 697 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 GJA9P57773 515 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PSME3P61289 254 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PSMC5P62195 406 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 POLD3Q15054 466 aaPredicted RBP13.17□□□□□ -0.3
MSH2-201ENST00000233146 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TFDP3Q5H9I0 405 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 SHEQ5VZ18 495 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 SPRED1Q7Z699 444 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 MYCT1Q8N699 235 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 PSD4Q8NDX1 1056 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 FAM110BQ8TC76 370 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 ST6GAL2Q96JF0 529 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 NPAS2Q99743 824 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 C9orf16Q9BUW7 83 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TMEM206Q9H813 350 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 SCPEP1Q9HB40 452 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 ACOXLQ9NUZ1 547 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 TMEM216Q9P0N5 145 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 AP4E1Q9UPM8 1137 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 SCN4AP35499 1836 aa13.17□□□□□ -0.3
MSH2-201ENST00000233146 E7ENX8 843 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 PDPK1O15530 556 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RASAL1O95294 804 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 PGK2P07205 417 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 HTR3AP46098 478 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SERPINB10P48595 397 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 HK2P52789 917 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 MAP3K7CLP57077 242 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 SMARCB1Q12824 385 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ZFYVE27Q5T4F4 411 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 CYP2R1Q6VVX0 501 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 MON1BQ7L1V2 547 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ZNF720Q7Z2F6 126 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 OR10Z1Q8NGY1 313 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 LHFPL5Q8TAF8 219 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 TMC2Q8TDI7 906 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SH3KBP1Q96B97 665 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 DACH2Q96NX9 599 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RNPEPQ9H4A4 650 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 TIGARQ9NQ88 270 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RNF103-CHMP3A0A140T963 221 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SGTAO43765 313 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 GLRA3O75311 464 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 EPN2O95208 641 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 USP17L8P0C7I0 530 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 CDKN2BP42772 138 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 MAMLD1Q13495 774 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 PLCL1Q15111 1095 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ESCO2Q56NI9 601 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 CCBE1Q6UXH8 406 aaPredicted RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 STXBP4Q6ZWJ1 553 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ADAM32Q8TC27 787 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SLC2A14Q8TDB8 520 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 CANT1Q8WVQ1 401 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 HERVK_113Q902F9 699 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 DYNLL2Q96FJ2 89 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RNF170Q96K19 258 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
MSH2-201ENST00000233146 GOLGA8JA6NMD2 632 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 PMM2O15305 246 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 XYLBO75191 536 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 FAM13AO94988 1023 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 CALCAP01258 141 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 DDOSTP39656 456 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 SERPINB9P50453 376 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 PPP1R3AQ16821 1122 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 TCAIMQ8N3R3 496 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 ACTL9Q8TC94 416 aa13.16□□□□□ -0.3
MSH2-201ENST00000233146 RSAD2Q8WXG1 361 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms