RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 ZMPSTE24O75844 475 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 SERPINF2P08697 491 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 ADRA1DP25100 572 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 DNAJC3Q13217 504 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 SLC12A1Q13621 1099 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 SLC5A9Q2M3M2 681 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 GRASPQ7Z6J2 395 aaPredicted RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 USP13Q92995 863 aaPredicted RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 ZNF669Q96BR6 464 aaPredicted RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 OTUB2Q96DC9 234 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 TRIM56Q9BRZ2 755 aaKnown RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 KCNK9Q9NPC2 374 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 INTS9Q9NV88 658 aaKnown RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 NKIRAS1Q9NYS0 192 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 KIAA1522Q9P206 1035 aaPredicted RBP24.1■■□□□ 1.45
RRP9-201ENST00000232888 PRKAG3Q9UGI9 489 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 VPS28Q9UK41 221 aa24.1■■□□□ 1.45
RRP9-201ENST00000232888 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.09■■□□□ 1.45
RRP9-201ENST00000232888 MT-ND3P03897 115 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 TPH1P17752 444 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 LSP1P33241 339 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 PBX2P40425 430 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 LAMB3Q13751 1172 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 RALGPS1Q5JS13 557 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 METTL3Q86U44 580 aaKnown RBP24.09■■□□□ 1.45
RRP9-201ENST00000232888 ACDQ96AP0 544 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 ALG14Q96F25 216 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 C2orf49Q9BVC5 232 aaPredicted RBP24.09■■□□□ 1.45
RRP9-201ENST00000232888 PPANQ9NQ55 473 aaKnown RBP24.09■■□□□ 1.45
RRP9-201ENST00000232888 TCAF1Q9Y4C2 921 aa24.09■■□□□ 1.45
RRP9-201ENST00000232888 FAM47DPA6NHR8 397 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 HLA-DPA1P20036 260 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 SERPINH1P50454 418 aaKnown RBP24.08■■□□□ 1.45
RRP9-201ENST00000232888 NSUN2Q08J23 767 aaKnown RBP eCLIP24.08■■□□□ 1.45
RRP9-201ENST00000232888 CYTH1Q15438 398 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 SLC1A5Q15758 541 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 FSCBQ5H9T9 825 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 PPP2R2DQ66LE6 453 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 LEKR1Q6ZMV7 388 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 ADGRD2Q7Z7M1 963 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 RBM23Q86U06 439 aaKnown RBP24.08■■□□□ 1.45
RRP9-201ENST00000232888 MDM1Q8TC05 714 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 SGSM3Q96HU1 749 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 FCRL3Q96P31 734 aaPredicted RBP24.08■■□□□ 1.45
RRP9-201ENST00000232888 GDF15Q99988 308 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 NKX2-4Q9H2Z4 354 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 PIDD1Q9HB75 910 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 CHRAC1Q9NRG0 131 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 DZANK1Q9NVP4 752 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 NSMCE4AQ9NXX6 385 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 ARIH1Q9Y4X5 557 aaPredicted RBP24.08■■□□□ 1.45
RRP9-201ENST00000232888 GBF1Q92538 1859 aa24.08■■□□□ 1.45
RRP9-201ENST00000232888 SCAMP3O14828 347 aaKnown RBP24.08■■□□□ 1.44
RRP9-201ENST00000232888 MUSKO15146 869 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 PLK1P53350 603 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 ARF5P84085 180 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 PCSK7Q16549 785 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 RETSATQ6NUM9 610 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 NLRP9Q7RTR0 991 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 SMG7Q92540 1137 aaKnown RBP24.08■■□□□ 1.44
RRP9-201ENST00000232888 PPP2R3CQ969Q6 453 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 IFT43Q96FT9 208 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 SFXN1Q9H9B4 322 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 KIF9Q9HAQ2 790 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 ZFATQ9P243 1243 aa24.08■■□□□ 1.44
RRP9-201ENST00000232888 MRPS23Q9Y3D9 190 aaKnown RBP24.08■■□□□ 1.44
RRP9-201ENST00000232888 HELZP42694 1942 aaKnown RBP24.07■■□□□ 1.44
RRP9-201ENST00000232888 HEATR9A2RTY3 570 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 SLC9A3R1O14745 358 aaPredicted RBP24.07■■□□□ 1.44
RRP9-201ENST00000232888 PIAS1O75925 651 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 FGF1P05230 155 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 CREB1P16220 341 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 PAMP19021 973 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 CR2P20023 1033 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 GLDCP23378 1020 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 MZF1P28698 734 aaPredicted RBP24.07■■□□□ 1.44
RRP9-201ENST00000232888 CSKP41240 450 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 CDK18Q07002 472 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 USP4Q13107 963 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 ZNF77Q15935 545 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 PDPK2PQ6A1A2 396 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 RASSF3Q86WH2 238 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 NUDCD1Q96RS6 583 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 CPNE1Q99829 537 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 SMG9Q9H0W8 520 aaKnown RBP24.07■■□□□ 1.44
RRP9-201ENST00000232888 CCDC134Q9H6E4 229 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 SLC28A3Q9HAS3 691 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 CCL26Q9Y258 94 aa24.07■■□□□ 1.44
RRP9-201ENST00000232888 A0A1W2PPM1 405 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 INSIG1O15503 277 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 PAPSS2O95340 614 aaPredicted RBP24.06■■□□□ 1.44
RRP9-201ENST00000232888 KRT4P19013 534 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 NTHL1P78549 312 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 SLC20A2Q08357 652 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 ZNF697Q5TEC3 545 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 TIFABQ6ZNK6 161 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 TTC16Q8NEE8 873 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 ATXN2LQ8WWM7 1075 aaKnown RBP24.06■■□□□ 1.44
RRP9-201ENST00000232888 MFSD3Q96ES6 412 aa24.06■■□□□ 1.44
RRP9-201ENST00000232888 EPN3Q9H201 632 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms