RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 MFN2O95140 757 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 CYP1A2P05177 515 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 NPR3P17342 541 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 DGCR6Q14129 220 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 KRT74Q7RTS7 529 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 UNC93AQ86WB7 457 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 PTGR2Q8N8N7 351 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 LNX1Q8TBB1 728 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 C2orf49Q9BVC5 232 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 MTFR1LQ9H019 292 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ADM5C9JUS6 153 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 TNFRSF8P28908 595 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 CYP2C18P33260 490 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 THOP1P52888 689 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 HSPA14Q0VDF9 509 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
LAMA4-201ENST00000230538 SLC25A24Q6NUK1 477 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 LRRN4Q8WUT4 740 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 GRIP2Q9C0E4 1043 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 RPS6KA6Q9UK32 745 aa11.67□□□□□ -0.54
LAMA4-201ENST00000230538 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 TBC1D3BA6NDS4 549 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 H7C0S8 307 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 LIASO43766 372 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ACSL4O60488 711 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MLYCDO95822 493 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CYP3A4P08684 503 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CHKAP35790 457 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SCNN1GP51170 649 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF143P52747 638 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 PFKPQ01813 784 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 TIMM50Q3ZCQ8 353 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MIIPQ5JXC2 388 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF549Q6P9A3 640 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 TRIM63Q969Q1 353 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MTMR9Q96QG7 549 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 BPIFA1Q9NP55 256 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SOHLH2Q9NX45 425 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MORF4L1Q9UBU8 362 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MAPRE3Q9UPY8 281 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MTF2Q9Y483 593 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ZMPSTE24O75844 475 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 NTRK1P04629 796 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CXCR2P25025 360 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ABL2P42684 1182 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 FAM220AQ7Z4H9 259 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 NET1Q7Z628 596 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 DENND6AQ8IWF6 608 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 KAT5Q92993 513 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CERS2Q96G23 380 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MBOAT7Q96N66 472 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 C1orf50Q9BV19 199 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 NUAK2Q9H093 628 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 EHD3Q9NZN3 535 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 PEX11AO75192 247 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 IFNA16P05015 189 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SNRPB2P08579 225 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CLCN5P51795 746 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 MARSP56192 900 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 GPAT3Q53EU6 434 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 IRGCQ6NXR0 463 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 UNC5AQ6ZN44 842 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CAMK1DQ8IU85 385 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ALLCQ8N6M5 410 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 HMG20AQ9NP66 347 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ZNF446Q9NWS9 450 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CLN6Q9NWW5 311 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 BTBD7Q9P203 1132 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 PSME2Q9UL46 239 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 WNT10BO00744 389 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SNUPNO95149 360 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CCNB1P14635 433 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 GRIA3P42263 894 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 GRIA4P48058 902 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 IDH2P48735 452 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CELF3Q5SZQ8 465 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ULK2Q8IYT8 1036 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ATL1Q8WXF7 558 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 C18orf25Q96B23 403 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 GALNT8Q9NY28 637 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 AKAP7Q9P0M2 348 aaPredicted RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SLC12A4Q9UP95 1085 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 ADRB2P07550 413 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 TNK2Q07912 1038 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 PPP3CAQ08209 521 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SPIRE1Q08AE8 756 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 EPS8Q12929 822 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 UBAP2LQ14157 1087 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SCAIQ8N9R8 606 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 EPS8L1Q8TE68 723 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CKAP2Q8WWK9 683 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 NELL1Q92832 810 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 REXO5Q96IC2 774 aaKnown RBP11.66□□□□□ -0.54
LAMA4-201ENST00000230538 NDNQ99608 321 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 FAIM2Q9BWQ8 316 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 CDH9Q9ULB4 789 aa11.66□□□□□ -0.54
LAMA4-201ENST00000230538 SLC28A1O00337 649 aa11.65□□□□□ -0.54
LAMA4-201ENST00000230538 KPNA5O15131 536 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms