RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 DEFB103AP81534 67 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 KLF10Q13118 480 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 KIAA0319Q5VV43 1072 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 KBTBD2Q8IY47 623 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 FBXW8Q8N3Y1 598 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 PTCD2Q8WV60 388 aaKnown RBP25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 DPF3Q92784 378 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 IFT43Q96FT9 208 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 VPS39Q96JC1 886 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 SMOQ99835 787 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 DRC3Q9H069 523 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 C20orf96Q9NUD7 363 aaPredicted RBP25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 TLK1Q9UKI8 766 aa25.26■■□□□ 1.63
RUNDC3A-201ENST00000225441 COL4A4P53420 1690 aaPredicted RBP25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 YJEFN3A6XGL0 299 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 PEX1O43933 1283 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 TADA2AO75478 443 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 SKAP2O75563 359 aaPredicted RBP25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 ALDH2P05091 517 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 NCF2P19878 526 aaPredicted RBP25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 PPIGQ13427 754 aaKnown RBP eCLIP25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 HSP90AA5PQ58FG0 334 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 IZUMO2Q6UXV1 221 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 PLD6Q8N2A8 252 aaKnown RBP25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 UCMAQ8WVF2 138 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 AGAP3Q96P47 875 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 TTC1Q99614 292 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 WDCPQ9H6R7 721 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 MRGBPQ9NV56 204 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 DDIT4Q9NX09 232 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 BCAP29Q9UHQ4 241 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 VPS28Q9UK41 221 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 PPM1HQ9ULR3 514 aa25.25■■□□□ 1.63
RUNDC3A-201ENST00000225441 COL4A6Q14031 1691 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 BAG2O95816 211 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 NCAM1P13591 858 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 ITGAXP20702 1163 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 PCSK1P29120 753 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 CACNA2D1P54289 1103 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 LIPMQ5VYY2 423 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 ATG14Q6ZNE5 492 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 C7orf61Q8IZ16 206 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 CPSF7Q8N684 471 aaKnown RBP25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 TDRD5Q8NAT2 981 aaKnown RBP25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 SMARCD1Q96GM5 515 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 SERPINI1Q99574 410 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 RTP3Q9BQQ7 232 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 CSNK1G1Q9HCP0 422 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 MARCH5Q9NX47 278 aa25.24■■□□□ 1.63
RUNDC3A-201ENST00000225441 MEI4A8MW99 385 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 MATN2O00339 956 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 HDAC3O15379 428 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 GALTP07902 379 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 NFKB1P19838 968 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 MTTPP55157 894 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 PRKAA1Q13131 559 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 HERC3Q15034 1050 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 OVOS1Q6IE37 1185 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 CNTN4Q8IWV2 1026 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 NPWQ8N729 165 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 PDCD6IPQ8WUM4 868 aaKnown RBP25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 BADQ92934 168 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 AGAP2Q99490 1192 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 MRM3Q9HC36 420 aaKnown RBP25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 TCF7L2Q9NQB0 619 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 PIM1P11309 404 aaPredicted RBP25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 CCNCP24863 283 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 FPGSQ05932 587 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 CDC16Q13042 620 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 PCID2Q5JVF3 399 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 C16orf89Q6UX73 402 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 C16orf59Q7L2K0 433 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 TP53INP2Q8IXH6 220 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 ARHGAP18Q8N392 663 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 POU5F2Q8N7G0 328 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZNF781Q8N8C0 355 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 PIP4K2CQ8TBX8 421 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 MFSD3Q96ES6 412 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 ACBD6Q9BR61 282 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 GATA5Q9BWX5 397 aaPredicted RBP25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 OR12D3Q9UGF7 316 aa25.23■■□□□ 1.63
RUNDC3A-201ENST00000225441 GOLGA8QA0A0J9YX86 632 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 GOLGA8OA6NCC3 632 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 GOLGA8NF8WBI6 632 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 CASQ2O14958 399 aaPredicted RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ANXA9O76027 345 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 CALRP27797 417 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 RPL14P50914 215 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZBTB17Q13105 803 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 SLC12A1Q13621 1099 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 CCNIQ14094 377 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 CERCAMQ5T4B2 595 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 OTOP2Q7RTS6 562 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZC3HC1Q86WB0 502 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 TMEM126BQ8IUX1 230 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 LZTR1Q8N653 840 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZMIZ2Q8NF64 920 aa25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 RP9Q8TA86 221 aaKnown RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZSCAN18Q8TBC5 510 aaPredicted RBP25.22■■□□□ 1.63
RUNDC3A-201ENST00000225441 ZNF689Q96CS4 500 aaPredicted RBP25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms