RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 POLD2P49005 469 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 CDH4P55283 916 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 RAB33AQ14088 237 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 CNGA3Q16281 694 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 RABGAP1LQ5R372 815 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 RFWD3Q6PCD5 774 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 COPG2Q9UBF2 871 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 MYLKQ15746 1914 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 C2P06681 752 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 FGF3P11487 239 aaPredicted RBP30.05■■■□□ 2.4
PABPN1-201ENST00000216727 PPP3CCP48454 512 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 MSLNQ13421 630 aaPredicted RBP30.05■■■□□ 2.4
PABPN1-201ENST00000216727 IHHQ14623 411 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 CRLF3Q8IUI8 442 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 CFAP52Q8N1V2 620 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 KLHL29Q96CT2 875 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 POLR1EQ9GZS1 481 aaKnown RBP30.05■■■□□ 2.4
PABPN1-201ENST00000216727 KCNK4Q9NYG8 393 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 SLC2A6Q9UGQ3 507 aa30.05■■■□□ 2.4
PABPN1-201ENST00000216727 DNAJC6O75061 913 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 AHSGP02765 367 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 F7P08709 466 aaPredicted RBP30.04■■■□□ 2.4
PABPN1-201ENST00000216727 LAG3P18627 525 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 GRM3Q14832 879 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 MTDHQ86UE4 582 aaKnown RBP30.04■■■□□ 2.4
PABPN1-201ENST00000216727 SLC25A41Q8N5S1 370 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 CAB39LQ9H9S4 337 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 ZFP69BQ9UJL9 534 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 ZFP37Q9Y6Q3 630 aaPredicted RBP30.04■■■□□ 2.4
PABPN1-201ENST00000216727 MIA3Q5JRA6 1907 aa30.04■■■□□ 2.4
PABPN1-201ENST00000216727 PAPSS2O95340 614 aaPredicted RBP30.03■■■□□ 2.4
PABPN1-201ENST00000216727 GABRB3P28472 473 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 ABCG1P45844 678 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 BTG3Q14201 252 aaPredicted RBP30.03■■■□□ 2.4
PABPN1-201ENST00000216727 LCA5Q86VQ0 697 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 CMTR2Q8IYT2 770 aaKnown RBP30.03■■■□□ 2.4
PABPN1-201ENST00000216727 PPP1R14CQ8TAE6 165 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 FAM167BQ9BTA0 163 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 ARHGEF3Q9NR81 526 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 ANKRD6Q9Y2G4 727 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 LOC285095A0A1B0GVY8 99 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 H3BNC9 293 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 STC2O76061 302 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 GNA12Q03113 381 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 VEPH1Q14D04 833 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 CLNKQ7Z7G1 428 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 DDX53Q86TM3 631 aaKnown RBP30.03■■■□□ 2.4
PABPN1-201ENST00000216727 DENND1CQ8IV53 801 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 PLD6Q8N2A8 252 aaKnown RBP30.03■■■□□ 2.4
PABPN1-201ENST00000216727 C20orf27Q9GZN8 174 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 SPG21Q9NZD8 308 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 HEY2Q9UBP5 337 aa30.03■■■□□ 2.4
PABPN1-201ENST00000216727 CLDN11O75508 207 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 SERPINE1P05121 402 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 GRK2P25098 689 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 DEFB103AP81534 67 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 THOC5Q13769 683 aaKnown RBP30.02■■■□□ 2.4
PABPN1-201ENST00000216727 SEPT6Q14141 434 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 DLG2Q15700 870 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 TAF12Q16514 161 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 TAF1BQ53T94 588 aaPredicted RBP30.02■■■□□ 2.4
PABPN1-201ENST00000216727 ALG1LQ6GMV1 187 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 ACVR1CQ8NER5 493 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 SKA1Q96BD8 255 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 SAR1AQ9NR31 198 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 UXTQ9UBK9 157 aaPredicted RBP30.02■■■□□ 2.4
PABPN1-201ENST00000216727 SLC39A10Q9ULF5 831 aa30.02■■■□□ 2.4
PABPN1-201ENST00000216727 KLKB1P03952 638 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 URODP06132 367 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 MYL2P10916 166 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 NQO1P15559 274 aaKnown RBP30.01■■■□□ 2.4
PABPN1-201ENST00000216727 KCNA4P22459 653 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 DNAJB1P25685 340 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 HOXD9P28356 352 aaPredicted RBP30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ETFBP38117 255 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ZNF235Q14590 738 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 CYB5D1Q6P9G0 228 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ZCCHC23Q6ZST2 131 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 TBC1D1Q86TI0 1168 aaPredicted RBP30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ARID3BQ8IVW6 561 aaPredicted RBP30.01■■■□□ 2.4
PABPN1-201ENST00000216727 C2CD4AQ8NCU7 369 aaPredicted RBP30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ZNF333Q96JL9 665 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 ZNF358Q9NW07 568 aa30.01■■■□□ 2.4
PABPN1-201ENST00000216727 EFCAB14O75071 495 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 CORO1AP31146 461 aaKnown RBP30.01■■■□□ 2.39
PABPN1-201ENST00000216727 TSTD2Q5T7W7 516 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 KIAA0408Q6ZU52 694 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 C10orf107Q8IVU9 208 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 DENND6AQ8IWF6 608 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 PRICKLE1Q96MT3 831 aaPredicted RBP30.01■■■□□ 2.39
PABPN1-201ENST00000216727 SEMA3CQ99985 751 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 ZNF395Q9H8N7 513 aaPredicted RBP30.01■■■□□ 2.39
PABPN1-201ENST00000216727 KLC4Q9NSK0 619 aa30.01■■■□□ 2.39
PABPN1-201ENST00000216727 A0A0D9SEW6 157 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 CPA3P15088 417 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 PLD1Q13393 1074 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 FAM117BQ6P1L5 589 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 CHST9Q7L1S5 443 aa30■■■□□ 2.39
PABPN1-201ENST00000216727 TMCO2Q7Z6W1 182 aaPredicted RBP30■■■□□ 2.39
PABPN1-201ENST00000216727 SIKE1Q9BRV8 207 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms